Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RTF1Q92541 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RTF1Q92541 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RTF1Q92541 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC25.36■■□□□ 1.65
RTF1Q92541 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
RTF1Q92541 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
RTF1Q92541 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RTF1Q92541 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25.36■■□□□ 1.65
RTF1Q92541 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC25.36■■□□□ 1.65
RTF1Q92541 DERL1-203ENST00000419562 918 ntTSL 2 BASIC25.36■■□□□ 1.65
RTF1Q92541 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.36■■□□□ 1.65
RTF1Q92541 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.36■■□□□ 1.65
RTF1Q92541 FDX2-206ENST00000492239 773 ntTSL 2 BASIC25.36■■□□□ 1.65
RTF1Q92541 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC25.36■■□□□ 1.65
RTF1Q92541 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC25.36■■□□□ 1.65
RTF1Q92541 C2orf69P3-201ENST00000565542 1120 ntBASIC25.36■■□□□ 1.65
RTF1Q92541 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC25.36■■□□□ 1.65
RTF1Q92541 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC25.36■■□□□ 1.65
RTF1Q92541 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC25.36■■□□□ 1.65
RTF1Q92541 KRT18P22-201ENST00000402024 1347 ntBASIC25.36■■□□□ 1.65
RTF1Q92541 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC25.35■■□□□ 1.65
RTF1Q92541 LBX2-AS1-202ENST00000603175 2083 ntBASIC25.35■■□□□ 1.65
RTF1Q92541 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RTF1Q92541 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTF1Q92541 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTF1Q92541 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RTF1Q92541 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
RTF1Q92541 CRAT-202ENST00000393384 973 ntTSL 2 BASIC25.35■■□□□ 1.65
RTF1Q92541 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC25.35■■□□□ 1.65
RTF1Q92541 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.35■■□□□ 1.65
RTF1Q92541 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.35■■□□□ 1.65
RTF1Q92541 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC25.35■■□□□ 1.65
RTF1Q92541 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC25.35■■□□□ 1.65
RTF1Q92541 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTF1Q92541 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.35■■□□□ 1.65
RTF1Q92541 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.35■■□□□ 1.65
RTF1Q92541 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
RTF1Q92541 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
RTF1Q92541 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC25.35■■□□□ 1.65
RTF1Q92541 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC25.35■■□□□ 1.65
RTF1Q92541 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC25.35■■□□□ 1.65
RTF1Q92541 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RTF1Q92541 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTF1Q92541 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTF1Q92541 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTF1Q92541 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTF1Q92541 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RTF1Q92541 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
RTF1Q92541 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC25.34■■□□□ 1.65
RTF1Q92541 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTF1Q92541 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTF1Q92541 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.34■■□□□ 1.65
RTF1Q92541 RCN1P1-201ENST00000400413 996 ntBASIC25.34■■□□□ 1.65
RTF1Q92541 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC25.34■■□□□ 1.65
RTF1Q92541 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC25.34■■□□□ 1.65
RTF1Q92541 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC25.34■■□□□ 1.65
RTF1Q92541 AC005363.2-201ENST00000618631 242 ntBASIC25.34■■□□□ 1.65
RTF1Q92541 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
RTF1Q92541 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC25.34■■□□□ 1.65
RTF1Q92541 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTF1Q92541 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTF1Q92541 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
RTF1Q92541 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTF1Q92541 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC25.34■■□□□ 1.65
RTF1Q92541 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RTF1Q92541 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RTF1Q92541 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC25.33■■□□□ 1.65
RTF1Q92541 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
RTF1Q92541 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
RTF1Q92541 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
RTF1Q92541 ANKRD18DP-204ENST00000455355 1975 ntBASIC25.33■■□□□ 1.65
RTF1Q92541 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTF1Q92541 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
RTF1Q92541 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTF1Q92541 GLRB-205ENST00000512619 728 ntTSL 3 BASIC25.33■■□□□ 1.65
RTF1Q92541 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC25.33■■□□□ 1.65
RTF1Q92541 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTF1Q92541 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTF1Q92541 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTF1Q92541 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
RTF1Q92541 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
RTF1Q92541 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
RTF1Q92541 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTF1Q92541 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
RTF1Q92541 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
RTF1Q92541 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTF1Q92541 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC25.32■■□□□ 1.64
RTF1Q92541 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTF1Q92541 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RTF1Q92541 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC25.32■■□□□ 1.64
RTF1Q92541 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
RTF1Q92541 MFAP1P1-201ENST00000442257 1255 ntBASIC25.32■■□□□ 1.64
RTF1Q92541 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.32■■□□□ 1.64
RTF1Q92541 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.32■■□□□ 1.64
RTF1Q92541 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTF1Q92541 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
RTF1Q92541 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RTF1Q92541 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTF1Q92541 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
RTF1Q92541 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms