Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC4A11Q8NBS3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC4A11Q8NBS3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 AL135905.2-201ENST00000584934 1404 ntBASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 AC012618.2-201ENST00000428058 849 ntBASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 AC233702.5-201ENST00000584107 538 ntBASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 AL445675.2-201ENST00000620291 557 ntBASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC4A11Q8NBS3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 KSR1P1-201ENST00000446298 240 ntBASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC4A11Q8NBS3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 AC073195.1-201ENST00000607241 877 ntBASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 AC007952.6-201ENST00000573168 2673 ntBASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 AC003957.1-201ENST00000625108 2673 ntBASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC4A11Q8NBS3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 AC113410.3-201ENST00000623366 203 ntBASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 AC066615.1-201ENST00000640911 628 ntBASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 AP006294.2-201ENST00000641667 209 ntBASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 AL049637.2-201ENST00000641778 930 ntBASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 SDHAP1-207ENST00000440850 2000 ntBASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC4A11Q8NBS3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms