Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 ZNF815P-204ENST00000434898 1737 ntBASIC19.95■□□□□ 0.78
RTL3Q8N8U3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.94■□□□□ 0.78
RTL3Q8N8U3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 AL445675.2-201ENST00000620291 557 ntBASIC19.93■□□□□ 0.78
RTL3Q8N8U3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL3Q8N8U3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 RPS2P55-201ENST00000397318 883 ntBASIC19.92■□□□□ 0.78
RTL3Q8N8U3 AC012618.2-201ENST00000428058 849 ntBASIC19.92■□□□□ 0.78
RTL3Q8N8U3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 AC107956.1-201ENST00000494359 873 ntBASIC19.92■□□□□ 0.78
RTL3Q8N8U3 AC008550.1-201ENST00000511500 884 ntBASIC19.92■□□□□ 0.78
RTL3Q8N8U3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 AC233702.5-201ENST00000584107 538 ntBASIC19.92■□□□□ 0.78
RTL3Q8N8U3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL3Q8N8U3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 AC104417.2-201ENST00000562989 1793 ntBASIC19.91■□□□□ 0.78
RTL3Q8N8U3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 Z82202.1-201ENST00000623446 1880 ntBASIC19.91■□□□□ 0.78
RTL3Q8N8U3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 KSR1P1-201ENST00000446298 240 ntBASIC19.91■□□□□ 0.78
RTL3Q8N8U3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 AC073195.1-201ENST00000607241 877 ntBASIC19.91■□□□□ 0.78
RTL3Q8N8U3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 AP006294.2-201ENST00000641667 209 ntBASIC19.91■□□□□ 0.78
RTL3Q8N8U3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL3Q8N8U3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.9■□□□□ 0.78
RTL3Q8N8U3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL3Q8N8U3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
RTL3Q8N8U3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms