Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCML4Q8N228 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.25■□□□□ 0.83
SCML4Q8N228 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SCML4Q8N228 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCML4Q8N228 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.24■□□□□ 0.83
SCML4Q8N228 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCML4Q8N228 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.24■□□□□ 0.83
SCML4Q8N228 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.24■□□□□ 0.83
SCML4Q8N228 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCML4Q8N228 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCML4Q8N228 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.24■□□□□ 0.83
SCML4Q8N228 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCML4Q8N228 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCML4Q8N228 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SCML4Q8N228 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCML4Q8N228 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SCML4Q8N228 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.24■□□□□ 0.83
SCML4Q8N228 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.24■□□□□ 0.83
SCML4Q8N228 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.24■□□□□ 0.83
SCML4Q8N228 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCML4Q8N228 REXO1L10P-201ENST00000615707 1290 ntBASIC20.24■□□□□ 0.83
SCML4Q8N228 REXO1L12P-201ENST00000622156 912 ntBASIC20.24■□□□□ 0.83
SCML4Q8N228 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.24■□□□□ 0.83
SCML4Q8N228 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.24■□□□□ 0.83
SCML4Q8N228 RCC2P6-201ENST00000526625 1557 ntBASIC20.24■□□□□ 0.83
SCML4Q8N228 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCML4Q8N228 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.24■□□□□ 0.83
SCML4Q8N228 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.23■□□□□ 0.83
SCML4Q8N228 KRT8P41-201ENST00000533985 1514 ntBASIC20.23■□□□□ 0.83
SCML4Q8N228 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SCML4Q8N228 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCML4Q8N228 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCML4Q8N228 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCML4Q8N228 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCML4Q8N228 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.23■□□□□ 0.83
SCML4Q8N228 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCML4Q8N228 AC004951.3-201ENST00000418645 1148 ntBASIC20.23■□□□□ 0.83
SCML4Q8N228 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.23■□□□□ 0.83
SCML4Q8N228 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.23■□□□□ 0.83
SCML4Q8N228 AC011506.1-201ENST00000474329 610 ntBASIC20.23■□□□□ 0.83
SCML4Q8N228 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SCML4Q8N228 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCML4Q8N228 DGCR10-201ENST00000609839 495 ntBASIC20.23■□□□□ 0.83
SCML4Q8N228 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.23■□□□□ 0.83
SCML4Q8N228 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SCML4Q8N228 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCML4Q8N228 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCML4Q8N228 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCML4Q8N228 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
SCML4Q8N228 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
SCML4Q8N228 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SCML4Q8N228 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCML4Q8N228 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.22■□□□□ 0.83
SCML4Q8N228 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCML4Q8N228 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SCML4Q8N228 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCML4Q8N228 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCML4Q8N228 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCML4Q8N228 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SCML4Q8N228 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCML4Q8N228 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.22■□□□□ 0.83
SCML4Q8N228 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
SCML4Q8N228 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCML4Q8N228 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.22■□□□□ 0.83
SCML4Q8N228 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.22■□□□□ 0.83
SCML4Q8N228 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCML4Q8N228 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCML4Q8N228 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.22■□□□□ 0.83
SCML4Q8N228 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SCML4Q8N228 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.22■□□□□ 0.83
SCML4Q8N228 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCML4Q8N228 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.21■□□□□ 0.83
SCML4Q8N228 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SCML4Q8N228 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCML4Q8N228 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCML4Q8N228 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.21■□□□□ 0.83
SCML4Q8N228 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.21■□□□□ 0.83
SCML4Q8N228 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.21■□□□□ 0.83
SCML4Q8N228 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCML4Q8N228 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.21■□□□□ 0.83
SCML4Q8N228 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.21■□□□□ 0.83
SCML4Q8N228 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.21■□□□□ 0.83
SCML4Q8N228 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCML4Q8N228 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.21■□□□□ 0.83
SCML4Q8N228 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCML4Q8N228 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCML4Q8N228 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCML4Q8N228 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SCML4Q8N228 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCML4Q8N228 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCML4Q8N228 LINC01465-201ENST00000408887 1940 ntBASIC20.2■□□□□ 0.82
SCML4Q8N228 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.2■□□□□ 0.82
SCML4Q8N228 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCML4Q8N228 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCML4Q8N228 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SCML4Q8N228 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.2■□□□□ 0.82
SCML4Q8N228 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.2■□□□□ 0.82
SCML4Q8N228 AC091390.4-202ENST00000476426 537 ntBASIC20.2■□□□□ 0.82
SCML4Q8N228 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SCML4Q8N228 AL355075.4-201ENST00000554988 638 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms