Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 Z98044.1-201ENST00000632503 1764 ntBASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01561Q8N1V8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 AL355472.2-201ENST00000422958 438 ntBASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 BID-214ENST00000617586 542 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 TEX21P-204ENST00000641479 1693 ntBASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01561Q8N1V8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 AL390719.1-204ENST00000412397 1219 ntBASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 AC007322.1-201ENST00000426983 750 ntBASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01561Q8N1V8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13□□□□□ -0.33
LINC01561Q8N1V8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01561Q8N1V8 AC006333.2-201ENST00000607957 2099 ntBASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms