Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 KRT18P6-201ENST00000555540 1265 ntBASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ZNF440Q8IYI8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 AC004264.1-201ENST00000608354 794 ntBASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF440Q8IYI8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 NBPF21P-201ENST00000425093 1451 ntBASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF440Q8IYI8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 AC069544.1-201ENST00000609399 999 ntBASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF440Q8IYI8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms