Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 MKRN4P-201ENST00000444706 1521 ntBASIC19.49■□□□□ 0.71
PACS2Q86VP3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PACS2Q86VP3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PACS2Q86VP3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
PACS2Q86VP3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.49■□□□□ 0.71
PACS2Q86VP3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PACS2Q86VP3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PACS2Q86VP3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PACS2Q86VP3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PACS2Q86VP3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.49■□□□□ 0.71
PACS2Q86VP3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.48■□□□□ 0.71
PACS2Q86VP3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PACS2Q86VP3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 AL691432.2-201ENST00000607222 2038 ntBASIC19.48■□□□□ 0.71
PACS2Q86VP3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.48■□□□□ 0.71
PACS2Q86VP3 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.48■□□□□ 0.71
PACS2Q86VP3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.48■□□□□ 0.71
PACS2Q86VP3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.48■□□□□ 0.71
PACS2Q86VP3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.48■□□□□ 0.71
PACS2Q86VP3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.48■□□□□ 0.71
PACS2Q86VP3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.48■□□□□ 0.71
PACS2Q86VP3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PACS2Q86VP3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.48■□□□□ 0.71
PACS2Q86VP3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PACS2Q86VP3 WIZP1-201ENST00000531444 2299 ntBASIC19.48■□□□□ 0.71
PACS2Q86VP3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.47■□□□□ 0.71
PACS2Q86VP3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.47■□□□□ 0.71
PACS2Q86VP3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
PACS2Q86VP3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PACS2Q86VP3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.47■□□□□ 0.71
PACS2Q86VP3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.47■□□□□ 0.71
PACS2Q86VP3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.47■□□□□ 0.71
PACS2Q86VP3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.47■□□□□ 0.71
PACS2Q86VP3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PACS2Q86VP3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.47■□□□□ 0.71
PACS2Q86VP3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PACS2Q86VP3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.47■□□□□ 0.71
PACS2Q86VP3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PACS2Q86VP3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.46■□□□□ 0.71
PACS2Q86VP3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.46■□□□□ 0.71
PACS2Q86VP3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.46■□□□□ 0.71
PACS2Q86VP3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PACS2Q86VP3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.46■□□□□ 0.71
PACS2Q86VP3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PACS2Q86VP3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
PACS2Q86VP3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.46■□□□□ 0.71
PACS2Q86VP3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PACS2Q86VP3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PACS2Q86VP3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PACS2Q86VP3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PACS2Q86VP3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PACS2Q86VP3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PACS2Q86VP3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.7
PACS2Q86VP3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PACS2Q86VP3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
PACS2Q86VP3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PACS2Q86VP3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS2Q86VP3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS2Q86VP3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PACS2Q86VP3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.45■□□□□ 0.7
PACS2Q86VP3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS2Q86VP3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.45■□□□□ 0.7
PACS2Q86VP3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.45■□□□□ 0.7
PACS2Q86VP3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS2Q86VP3 AL137784.2-201ENST00000607332 1000 ntBASIC19.45■□□□□ 0.7
PACS2Q86VP3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS2Q86VP3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PACS2Q86VP3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.45■□□□□ 0.7
PACS2Q86VP3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.45■□□□□ 0.7
PACS2Q86VP3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS2Q86VP3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.45■□□□□ 0.7
PACS2Q86VP3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PACS2Q86VP3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PACS2Q86VP3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms