Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC010653.2-201ENST00000623505 997 ntBASIC16.62■□□□□ 0.25
RAI1Q7Z5J4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAI1Q7Z5J4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.62■□□□□ 0.25
RAI1Q7Z5J4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI1Q7Z5J4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.62■□□□□ 0.25
RAI1Q7Z5J4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI1Q7Z5J4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 AC083849.1-201ENST00000615227 514 ntBASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 AL138966.2-201ENST00000621997 464 ntBASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAI1Q7Z5J4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 ATP5G1P1-201ENST00000448724 379 ntBASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 LINC01238-205ENST00000567549 1107 ntBASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
RAI1Q7Z5J4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 AL031133.1-201ENST00000406807 723 ntBASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 AC087388.1-201ENST00000571370 1112 ntBASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAI1Q7Z5J4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAI1Q7Z5J4 AL359075.1-203ENST00000462729 1002 ntBASIC16.58■□□□□ 0.25
RAI1Q7Z5J4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAI1Q7Z5J4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.58■□□□□ 0.25
RAI1Q7Z5J4 AC116407.4-201ENST00000623319 1061 ntBASIC16.58■□□□□ 0.25
RAI1Q7Z5J4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RAI1Q7Z5J4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAI1Q7Z5J4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAI1Q7Z5J4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAI1Q7Z5J4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAI1Q7Z5J4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.58■□□□□ 0.25
RAI1Q7Z5J4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms