Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSMD2Q7Z408 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.43■□□□□ 0.22
CSMD2Q7Z408 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSMD2Q7Z408 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSMD2Q7Z408 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.43■□□□□ 0.22
CSMD2Q7Z408 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSMD2Q7Z408 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.43■□□□□ 0.22
CSMD2Q7Z408 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.43■□□□□ 0.22
CSMD2Q7Z408 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSMD2Q7Z408 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSMD2Q7Z408 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 AC117500.6-201ENST00000624871 588 ntBASIC16.42■□□□□ 0.22
CSMD2Q7Z408 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 SLC25A1P1-201ENST00000528351 927 ntBASIC16.42■□□□□ 0.22
CSMD2Q7Z408 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD2Q7Z408 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.41■□□□□ 0.22
CSMD2Q7Z408 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 IL9RP2-201ENST00000423948 1312 ntBASIC16.41■□□□□ 0.22
CSMD2Q7Z408 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD2Q7Z408 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 KRT8P41-201ENST00000533985 1514 ntBASIC16.4■□□□□ 0.22
CSMD2Q7Z408 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 KRT18P31-201ENST00000506277 1292 ntBASIC16.4■□□□□ 0.22
CSMD2Q7Z408 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 KRT8P8-201ENST00000434750 1448 ntBASIC16.4■□□□□ 0.22
CSMD2Q7Z408 KRT8P17-201ENST00000453110 1448 ntBASIC16.4■□□□□ 0.22
CSMD2Q7Z408 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CSMD2Q7Z408 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CSMD2Q7Z408 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 FP700111.2-201ENST00000619190 1892 ntBASIC16.39■□□□□ 0.21
CSMD2Q7Z408 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 AL355385.1-201ENST00000606123 409 ntBASIC16.39■□□□□ 0.21
CSMD2Q7Z408 SMG8-203ENST00000578922 2178 ntBASIC16.39■□□□□ 0.21
CSMD2Q7Z408 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CSMD2Q7Z408 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms