Protein–RNA interactions for Protein: Q76G19

PDZD4, PDZ domain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4Q76G19 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDZD4Q76G19 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDZD4Q76G19 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PDZD4Q76G19 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDZD4Q76G19 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.63■□□□□ 0.89
PDZD4Q76G19 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDZD4Q76G19 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.63■□□□□ 0.89
PDZD4Q76G19 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDZD4Q76G19 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.63■□□□□ 0.89
PDZD4Q76G19 AC092865.7-201ENST00000641832 219 ntBASIC20.63■□□□□ 0.89
PDZD4Q76G19 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.63■□□□□ 0.89
PDZD4Q76G19 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.63■□□□□ 0.89
PDZD4Q76G19 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.63■□□□□ 0.89
PDZD4Q76G19 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.63■□□□□ 0.89
PDZD4Q76G19 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDZD4Q76G19 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDZD4Q76G19 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDZD4Q76G19 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.63■□□□□ 0.89
PDZD4Q76G19 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDZD4Q76G19 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZD4Q76G19 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZD4Q76G19 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDZD4Q76G19 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDZD4Q76G19 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZD4Q76G19 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZD4Q76G19 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDZD4Q76G19 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 AL391422.3-201ENST00000603791 2761 ntBASIC20.62■□□□□ 0.89
PDZD4Q76G19 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDZD4Q76G19 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 TUBB8P6-201ENST00000436895 1288 ntBASIC20.62■□□□□ 0.89
PDZD4Q76G19 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDZD4Q76G19 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 AL445675.2-201ENST00000620291 557 ntBASIC20.62■□□□□ 0.89
PDZD4Q76G19 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZD4Q76G19 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.62■□□□□ 0.89
PDZD4Q76G19 FSCN1P1-201ENST00000568912 1481 ntBASIC20.62■□□□□ 0.89
PDZD4Q76G19 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.61■□□□□ 0.89
PDZD4Q76G19 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 TCF3P1-201ENST00000423021 1937 ntBASIC20.61■□□□□ 0.89
PDZD4Q76G19 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZD4Q76G19 KRT18P22-201ENST00000402024 1347 ntBASIC20.61■□□□□ 0.89
PDZD4Q76G19 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZD4Q76G19 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.61■□□□□ 0.89
PDZD4Q76G19 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZD4Q76G19 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.61■□□□□ 0.89
PDZD4Q76G19 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZD4Q76G19 AC026271.3-201ENST00000571884 352 ntBASIC20.61■□□□□ 0.89
PDZD4Q76G19 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PDZD4Q76G19 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 CYP2D8P-201ENST00000433633 1490 ntBASIC20.61■□□□□ 0.89
PDZD4Q76G19 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
PDZD4Q76G19 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZD4Q76G19 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.6■□□□□ 0.89
PDZD4Q76G19 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDZD4Q76G19 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZD4Q76G19 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.6■□□□□ 0.89
PDZD4Q76G19 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZD4Q76G19 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZD4Q76G19 AC005521.1-201ENST00000393351 872 ntBASIC20.6■□□□□ 0.89
PDZD4Q76G19 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.6■□□□□ 0.89
PDZD4Q76G19 KRT18P16-201ENST00000510337 1294 ntBASIC20.6■□□□□ 0.89
PDZD4Q76G19 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.6■□□□□ 0.89
PDZD4Q76G19 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.6■□□□□ 0.89
PDZD4Q76G19 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PDZD4Q76G19 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDZD4Q76G19 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
PDZD4Q76G19 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZD4Q76G19 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZD4Q76G19 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZD4Q76G19 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZD4Q76G19 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZD4Q76G19 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDZD4Q76G19 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZD4Q76G19 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZD4Q76G19 AC113347.1-201ENST00000413321 391 ntBASIC20.59■□□□□ 0.89
PDZD4Q76G19 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDZD4Q76G19 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms