Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 Z82202.1-201ENST00000623446 1880 ntBASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 AC233263.1-201ENST00000578059 224 ntBASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 AC093484.2-201ENST00000580996 2166 ntBASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 MTDHP1-201ENST00000605323 784 ntBASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NHLRC1Q6VVB1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 YBX1P10-201ENST00000444752 975 ntBASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 KRT18P16-201ENST00000510337 1294 ntBASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 TNXA-203ENST00000507684 2038 ntBASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 AP006587.1-201ENST00000534129 1502 ntBASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.42■□□□□ 0.38
NHLRC1Q6VVB1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 ESRRAP1-201ENST00000400596 1257 ntBASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms