Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CTR9Q6PD62 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 PCDHAC2-203ENST00000615316 3011 ntBASIC23.09■■□□□ 1.29
CTR9Q6PD62 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CTR9Q6PD62 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CTR9Q6PD62 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 UNC93B2-201ENST00000285383 730 ntBASIC23.09■■□□□ 1.29
CTR9Q6PD62 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 FSCN1P1-201ENST00000568912 1481 ntBASIC23.09■■□□□ 1.29
CTR9Q6PD62 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CTR9Q6PD62 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CTR9Q6PD62 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CTR9Q6PD62 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
CTR9Q6PD62 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.08■■□□□ 1.29
CTR9Q6PD62 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CTR9Q6PD62 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CTR9Q6PD62 AC008040.2-201ENST00000461049 708 ntBASIC23.08■■□□□ 1.29
CTR9Q6PD62 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.08■■□□□ 1.29
CTR9Q6PD62 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CTR9Q6PD62 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CTR9Q6PD62 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CTR9Q6PD62 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CTR9Q6PD62 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CTR9Q6PD62 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CTR9Q6PD62 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.08■■□□□ 1.28
CTR9Q6PD62 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC23.08■■□□□ 1.28
CTR9Q6PD62 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CTR9Q6PD62 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.28
CTR9Q6PD62 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 Z85996.1-201ENST00000494644 937 ntBASIC23.07■■□□□ 1.28
CTR9Q6PD62 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 AC130371.2-201ENST00000619443 611 ntBASIC23.07■■□□□ 1.28
CTR9Q6PD62 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CTR9Q6PD62 KRT8P9-201ENST00000558927 1449 ntBASIC23.07■■□□□ 1.28
CTR9Q6PD62 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.07■■□□□ 1.28
CTR9Q6PD62 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CTR9Q6PD62 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.06■■□□□ 1.28
CTR9Q6PD62 RCC2P6-201ENST00000526625 1557 ntBASIC23.06■■□□□ 1.28
CTR9Q6PD62 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.06■■□□□ 1.28
CTR9Q6PD62 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.06■■□□□ 1.28
CTR9Q6PD62 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 ECEL1P3-201ENST00000427961 737 ntBASIC23.06■■□□□ 1.28
CTR9Q6PD62 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.06■■□□□ 1.28
CTR9Q6PD62 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CTR9Q6PD62 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.06■■□□□ 1.28
CTR9Q6PD62 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.06■■□□□ 1.28
CTR9Q6PD62 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.06■■□□□ 1.28
CTR9Q6PD62 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.06■■□□□ 1.28
CTR9Q6PD62 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CTR9Q6PD62 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CTR9Q6PD62 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CTR9Q6PD62 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.05■■□□□ 1.28
CTR9Q6PD62 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CTR9Q6PD62 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.05■■□□□ 1.28
CTR9Q6PD62 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CTR9Q6PD62 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms