Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 ZNF815P-204ENST00000434898 1737 ntBASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF549Q6P9A3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 BX323043.1-201ENST00000641006 1765 ntBASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 KRT18P16-201ENST00000510337 1294 ntBASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF549Q6P9A3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF549Q6P9A3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF549Q6P9A3 KRT8P8-201ENST00000434750 1448 ntBASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 AP003097.1-201ENST00000530657 1135 ntBASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 KRT18P6-201ENST00000555540 1265 ntBASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 AC233263.1-201ENST00000578059 224 ntBASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF549Q6P9A3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF549Q6P9A3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms