Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.68□□□□□ -0.06
MRPL54Q6P161 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.68□□□□□ -0.06
MRPL54Q6P161 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.68□□□□□ -0.06
MRPL54Q6P161 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MRPL54Q6P161 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.67□□□□□ -0.06
MRPL54Q6P161 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.67□□□□□ -0.06
MRPL54Q6P161 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
MRPL54Q6P161 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.67□□□□□ -0.06
MRPL54Q6P161 AC008175.2-201ENST00000612840 297 ntBASIC14.67□□□□□ -0.06
MRPL54Q6P161 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.67□□□□□ -0.06
MRPL54Q6P161 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.67□□□□□ -0.06
MRPL54Q6P161 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL54Q6P161 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 AL138724.1-201ENST00000606771 1088 ntBASIC14.66□□□□□ -0.06
MRPL54Q6P161 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 AC012354.3-201ENST00000623734 483 ntBASIC14.66□□□□□ -0.06
MRPL54Q6P161 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MRPL54Q6P161 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL54Q6P161 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.65□□□□□ -0.06
MRPL54Q6P161 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL54Q6P161 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms