Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 AL023973.1-201ENST00000624619 620 ntBASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 AL121956.5-201ENST00000625261 221 ntBASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC18Q5T9S5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC18Q5T9S5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC18Q5T9S5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC30.08■■■□□ 2.41
CCDC18Q5T9S5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC18Q5T9S5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC30.08■■■□□ 2.41
CCDC18Q5T9S5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC18Q5T9S5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC30.08■■■□□ 2.41
CCDC18Q5T9S5 DBP-204ENST00000599385 709 ntTSL 3 BASIC30.08■■■□□ 2.41
CCDC18Q5T9S5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC30.08■■■□□ 2.41
CCDC18Q5T9S5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC30.08■■■□□ 2.41
CCDC18Q5T9S5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC18Q5T9S5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
CCDC18Q5T9S5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CCDC18Q5T9S5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC30.07■■■□□ 2.4
CCDC18Q5T9S5 HOMER2P1-201ENST00000455653 964 ntBASIC30.07■■■□□ 2.4
CCDC18Q5T9S5 AL359075.1-203ENST00000462729 1002 ntBASIC30.07■■■□□ 2.4
CCDC18Q5T9S5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC30.07■■■□□ 2.4
CCDC18Q5T9S5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
CCDC18Q5T9S5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC30.07■■■□□ 2.4
CCDC18Q5T9S5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
CCDC18Q5T9S5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC30.07■■■□□ 2.4
CCDC18Q5T9S5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
CCDC18Q5T9S5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 CLDN5-201ENST00000403084 2357 ntBASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 AC011558.1-201ENST00000623459 338 ntBASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 KRT8P45-201ENST00000414328 1447 ntBASIC30.06■■■□□ 2.4
CCDC18Q5T9S5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC18Q5T9S5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC30.05■■■□□ 2.4
CCDC18Q5T9S5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC18Q5T9S5 UPK3BP1-201ENST00000428678 509 ntBASIC30.05■■■□□ 2.4
CCDC18Q5T9S5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC30.05■■■□□ 2.4
CCDC18Q5T9S5 NEK4P2-201ENST00000580004 1012 ntBASIC30.05■■■□□ 2.4
CCDC18Q5T9S5 AC083849.1-201ENST00000615227 514 ntBASIC30.05■■■□□ 2.4
CCDC18Q5T9S5 AP000550.4-202ENST00000639755 178 ntBASIC30.05■■■□□ 2.4
CCDC18Q5T9S5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC18Q5T9S5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC30.05■■■□□ 2.4
CCDC18Q5T9S5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC18Q5T9S5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC18Q5T9S5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC18Q5T9S5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC18Q5T9S5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC18Q5T9S5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC30.04■■■□□ 2.4
CCDC18Q5T9S5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC30.04■■■□□ 2.4
CCDC18Q5T9S5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC30.04■■■□□ 2.4
CCDC18Q5T9S5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC18Q5T9S5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
CCDC18Q5T9S5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC18Q5T9S5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
CCDC18Q5T9S5 AP000523.1-201ENST00000398242 1049 ntBASIC30.03■■■□□ 2.4
CCDC18Q5T9S5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
CCDC18Q5T9S5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC30.03■■■□□ 2.4
CCDC18Q5T9S5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC30.03■■■□□ 2.4
CCDC18Q5T9S5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC30.03■■■□□ 2.4
CCDC18Q5T9S5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
CCDC18Q5T9S5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC30.03■■■□□ 2.4
CCDC18Q5T9S5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC18Q5T9S5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC30.03■■■□□ 2.4
CCDC18Q5T9S5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CCDC18Q5T9S5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CCDC18Q5T9S5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CCDC18Q5T9S5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC30.02■■■□□ 2.4
CCDC18Q5T9S5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
CCDC18Q5T9S5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC30.02■■■□□ 2.4
CCDC18Q5T9S5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC30.02■■■□□ 2.4
CCDC18Q5T9S5 MIR4674-201ENST00000582457 87 ntBASIC30.02■■■□□ 2.4
CCDC18Q5T9S5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC30.02■■■□□ 2.4
CCDC18Q5T9S5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
CCDC18Q5T9S5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CCDC18Q5T9S5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CCDC18Q5T9S5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC30.01■■■□□ 2.4
CCDC18Q5T9S5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC30.01■■■□□ 2.4
CCDC18Q5T9S5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
CCDC18Q5T9S5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC30.01■■■□□ 2.4
CCDC18Q5T9S5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC30.01■■■□□ 2.4
CCDC18Q5T9S5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CCDC18Q5T9S5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC30.01■■■□□ 2.4
CCDC18Q5T9S5 AL671277.2-201ENST00000458060 996 ntBASIC30.01■■■□□ 2.4
CCDC18Q5T9S5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC30.01■■■□□ 2.4
CCDC18Q5T9S5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC30.01■■■□□ 2.4
CCDC18Q5T9S5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC30.01■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms