Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SNAPC4Q5SXM2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
SNAPC4Q5SXM2 PLK5-205ENST00000642079 1969 ntBASIC31.87■■■□□ 2.69
SNAPC4Q5SXM2 KRT8P11-201ENST00000409686 1436 ntBASIC31.87■■■□□ 2.69
SNAPC4Q5SXM2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
SNAPC4Q5SXM2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC31.87■■■□□ 2.69
SNAPC4Q5SXM2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC31.87■■■□□ 2.69
SNAPC4Q5SXM2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC31.87■■■□□ 2.69
SNAPC4Q5SXM2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC31.87■■■□□ 2.69
SNAPC4Q5SXM2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC31.87■■■□□ 2.69
SNAPC4Q5SXM2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
SNAPC4Q5SXM2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC31.87■■■□□ 2.69
SNAPC4Q5SXM2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
SNAPC4Q5SXM2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SNAPC4Q5SXM2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC31.86■■■□□ 2.69
SNAPC4Q5SXM2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC31.86■■■□□ 2.69
SNAPC4Q5SXM2 AL117328.2-201ENST00000624617 1940 ntBASIC31.86■■■□□ 2.69
SNAPC4Q5SXM2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SNAPC4Q5SXM2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 AP002469.2-201ENST00000531724 424 ntBASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SNAPC4Q5SXM2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 NME1-207ENST00000480143 964 ntTSL 2 BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 AC093525.10-201ENST00000625130 1569 ntBASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
SNAPC4Q5SXM2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SNAPC4Q5SXM2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC31.83■■■□□ 2.69
SNAPC4Q5SXM2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SNAPC4Q5SXM2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC31.83■■■□□ 2.69
SNAPC4Q5SXM2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SNAPC4Q5SXM2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SNAPC4Q5SXM2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
SNAPC4Q5SXM2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SNAPC4Q5SXM2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC31.83■■■□□ 2.69
SNAPC4Q5SXM2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 TBC1D3P2-202ENST00000577902 1649 ntBASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 TPSP2-201ENST00000561760 610 ntBASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC31.82■■■□□ 2.68
SNAPC4Q5SXM2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SNAPC4Q5SXM2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SNAPC4Q5SXM2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC31.81■■■□□ 2.68
SNAPC4Q5SXM2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
SNAPC4Q5SXM2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
SNAPC4Q5SXM2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
SNAPC4Q5SXM2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
SNAPC4Q5SXM2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC31.81■■■□□ 2.68
SNAPC4Q5SXM2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SNAPC4Q5SXM2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
SNAPC4Q5SXM2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms