Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 B3GAT3P1-201ENST00000471720 806 ntBASIC23.77■■□□□ 1.4
TNNI3KQ59H18 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 MIR6786-201ENST00000616843 113 ntBASIC23.77■■□□□ 1.4
TNNI3KQ59H18 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNNI3KQ59H18 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 RCC2P6-201ENST00000526625 1557 ntBASIC23.76■■□□□ 1.39
TNNI3KQ59H18 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNNI3KQ59H18 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 AC008040.2-201ENST00000461049 708 ntBASIC23.75■■□□□ 1.39
TNNI3KQ59H18 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.75■■□□□ 1.39
TNNI3KQ59H18 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 RBM17P1-201ENST00000453646 1190 ntBASIC23.74■■□□□ 1.39
TNNI3KQ59H18 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNNI3KQ59H18 FSCN1P1-201ENST00000568912 1481 ntBASIC23.74■■□□□ 1.39
TNNI3KQ59H18 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 KRT8P41-201ENST00000533985 1514 ntBASIC23.73■■□□□ 1.39
TNNI3KQ59H18 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.73■■□□□ 1.39
TNNI3KQ59H18 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNNI3KQ59H18 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.72■■□□□ 1.39
TNNI3KQ59H18 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.72■■□□□ 1.39
TNNI3KQ59H18 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.72■■□□□ 1.39
TNNI3KQ59H18 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
TNNI3KQ59H18 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms