Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 Z85996.1-201ENST00000494644 937 ntBASIC22.33■■□□□ 1.17
USH1GQ495M9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
USH1GQ495M9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.33■■□□□ 1.17
USH1GQ495M9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
USH1GQ495M9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
USH1GQ495M9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.33■■□□□ 1.16
USH1GQ495M9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.33■■□□□ 1.16
USH1GQ495M9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
USH1GQ495M9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
USH1GQ495M9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
USH1GQ495M9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
USH1GQ495M9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.32■■□□□ 1.16
USH1GQ495M9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
USH1GQ495M9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
USH1GQ495M9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
USH1GQ495M9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
USH1GQ495M9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
USH1GQ495M9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
USH1GQ495M9 CRYGFP-201ENST00000418459 633 ntBASIC22.32■■□□□ 1.16
USH1GQ495M9 AC004951.3-201ENST00000418645 1148 ntBASIC22.32■■□□□ 1.16
USH1GQ495M9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.32■■□□□ 1.16
USH1GQ495M9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.32■■□□□ 1.16
USH1GQ495M9 AC097488.1-201ENST00000507834 756 ntBASIC22.32■■□□□ 1.16
USH1GQ495M9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.32■■□□□ 1.16
USH1GQ495M9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.32■■□□□ 1.16
USH1GQ495M9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.32■■□□□ 1.16
USH1GQ495M9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
USH1GQ495M9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.32■■□□□ 1.16
USH1GQ495M9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
USH1GQ495M9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.32■■□□□ 1.16
USH1GQ495M9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
USH1GQ495M9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
USH1GQ495M9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.31■■□□□ 1.16
USH1GQ495M9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.31■■□□□ 1.16
USH1GQ495M9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
USH1GQ495M9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
USH1GQ495M9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
USH1GQ495M9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.31■■□□□ 1.16
USH1GQ495M9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.31■■□□□ 1.16
USH1GQ495M9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.31■■□□□ 1.16
USH1GQ495M9 NAPSB-206ENST00000562112 1266 ntBASIC22.31■■□□□ 1.16
USH1GQ495M9 AL160286.2-201ENST00000567150 934 ntBASIC22.31■■□□□ 1.16
USH1GQ495M9 SLC25A1P4-201ENST00000567977 778 ntBASIC22.31■■□□□ 1.16
USH1GQ495M9 AC130371.2-201ENST00000619443 611 ntBASIC22.31■■□□□ 1.16
USH1GQ495M9 AC010947.1-201ENST00000623454 693 ntBASIC22.31■■□□□ 1.16
USH1GQ495M9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.31■■□□□ 1.16
USH1GQ495M9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
USH1GQ495M9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
USH1GQ495M9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
USH1GQ495M9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
USH1GQ495M9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
USH1GQ495M9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.3■■□□□ 1.16
USH1GQ495M9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.3■■□□□ 1.16
USH1GQ495M9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
USH1GQ495M9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USH1GQ495M9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
USH1GQ495M9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USH1GQ495M9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.3■■□□□ 1.16
USH1GQ495M9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.3■■□□□ 1.16
USH1GQ495M9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.3■■□□□ 1.16
USH1GQ495M9 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.3■■□□□ 1.16
USH1GQ495M9 DGCR10-201ENST00000609839 495 ntBASIC22.3■■□□□ 1.16
USH1GQ495M9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.3■■□□□ 1.16
USH1GQ495M9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USH1GQ495M9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.3■■□□□ 1.16
USH1GQ495M9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USH1GQ495M9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
USH1GQ495M9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
USH1GQ495M9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.29■■□□□ 1.16
USH1GQ495M9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USH1GQ495M9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.29■■□□□ 1.16
USH1GQ495M9 LINC01568-207ENST00000641790 1380 ntBASIC22.29■■□□□ 1.16
USH1GQ495M9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
USH1GQ495M9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USH1GQ495M9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
USH1GQ495M9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.29■■□□□ 1.16
USH1GQ495M9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
USH1GQ495M9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
USH1GQ495M9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
USH1GQ495M9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.29■■□□□ 1.16
USH1GQ495M9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC22.29■■□□□ 1.16
USH1GQ495M9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.29■■□□□ 1.16
USH1GQ495M9 FAM210CP-201ENST00000445714 574 ntBASIC22.29■■□□□ 1.16
USH1GQ495M9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.29■■□□□ 1.16
USH1GQ495M9 AC091390.4-202ENST00000476426 537 ntBASIC22.29■■□□□ 1.16
USH1GQ495M9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.29■■□□□ 1.16
USH1GQ495M9 AC145285.6-201ENST00000604632 637 ntBASIC22.29■■□□□ 1.16
USH1GQ495M9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.29■■□□□ 1.16
USH1GQ495M9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USH1GQ495M9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USH1GQ495M9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
USH1GQ495M9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
USH1GQ495M9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms