Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.83■■□□□ 1.41
ATP2B3Q16720 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ATP2B3Q16720 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ATP2B3Q16720 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
ATP2B3Q16720 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
ATP2B3Q16720 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ATP2B3Q16720 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ATP2B3Q16720 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
ATP2B3Q16720 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
ATP2B3Q16720 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
ATP2B3Q16720 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.82■■□□□ 1.4
ATP2B3Q16720 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP2B3Q16720 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.82■■□□□ 1.4
ATP2B3Q16720 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP2B3Q16720 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP2B3Q16720 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP2B3Q16720 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ATP2B3Q16720 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.82■■□□□ 1.4
ATP2B3Q16720 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.82■■□□□ 1.4
ATP2B3Q16720 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.82■■□□□ 1.4
ATP2B3Q16720 AC008040.2-201ENST00000461049 708 ntBASIC23.82■■□□□ 1.4
ATP2B3Q16720 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.82■■□□□ 1.4
ATP2B3Q16720 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.82■■□□□ 1.4
ATP2B3Q16720 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
ATP2B3Q16720 DGCR10-201ENST00000609839 495 ntBASIC23.82■■□□□ 1.4
ATP2B3Q16720 AC011298.2-201ENST00000617989 482 ntBASIC23.82■■□□□ 1.4
ATP2B3Q16720 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.82■■□□□ 1.4
ATP2B3Q16720 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP2B3Q16720 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
ATP2B3Q16720 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.82■■□□□ 1.4
ATP2B3Q16720 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP2B3Q16720 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.81■■□□□ 1.4
ATP2B3Q16720 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.81■■□□□ 1.4
ATP2B3Q16720 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2B3Q16720 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2B3Q16720 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2B3Q16720 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.81■■□□□ 1.4
ATP2B3Q16720 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.81■■□□□ 1.4
ATP2B3Q16720 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2B3Q16720 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2B3Q16720 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2B3Q16720 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.81■■□□□ 1.4
ATP2B3Q16720 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.81■■□□□ 1.4
ATP2B3Q16720 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
ATP2B3Q16720 AC130371.2-201ENST00000619443 611 ntBASIC23.81■■□□□ 1.4
ATP2B3Q16720 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.81■■□□□ 1.4
ATP2B3Q16720 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2B3Q16720 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2B3Q16720 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2B3Q16720 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.81■■□□□ 1.4
ATP2B3Q16720 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
ATP2B3Q16720 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2B3Q16720 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2B3Q16720 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2B3Q16720 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2B3Q16720 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2B3Q16720 AC004951.3-201ENST00000418645 1148 ntBASIC23.8■■□□□ 1.4
ATP2B3Q16720 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 AL160286.2-201ENST00000567150 934 ntBASIC23.8■■□□□ 1.4
ATP2B3Q16720 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2B3Q16720 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2B3Q16720 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
ATP2B3Q16720 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
ATP2B3Q16720 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2B3Q16720 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
ATP2B3Q16720 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.79■■□□□ 1.4
ATP2B3Q16720 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ATP2B3Q16720 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2B3Q16720 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2B3Q16720 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC23.79■■□□□ 1.4
ATP2B3Q16720 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ATP2B3Q16720 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.79■■□□□ 1.4
ATP2B3Q16720 CYP2D8P-201ENST00000433633 1490 ntBASIC23.79■■□□□ 1.4
ATP2B3Q16720 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2B3Q16720 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.79■■□□□ 1.4
ATP2B3Q16720 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2B3Q16720 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
ATP2B3Q16720 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2B3Q16720 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2B3Q16720 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2B3Q16720 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.78■■□□□ 1.4
ATP2B3Q16720 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2B3Q16720 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2B3Q16720 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.78■■□□□ 1.4
ATP2B3Q16720 AC091390.4-202ENST00000476426 537 ntBASIC23.78■■□□□ 1.4
ATP2B3Q16720 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms