Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC26.33■■□□□ 1.81
COL16A1Q07092 DPP3P2-201ENST00000416030 1696 ntBASIC26.33■■□□□ 1.8
COL16A1Q07092 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC26.33■■□□□ 1.8
COL16A1Q07092 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL16A1Q07092 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
COL16A1Q07092 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC26.32■■□□□ 1.8
COL16A1Q07092 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC26.32■■□□□ 1.8
COL16A1Q07092 AC138894.3-201ENST00000603787 634 ntBASIC26.32■■□□□ 1.8
COL16A1Q07092 ECEL1P1-201ENST00000373592 1742 ntBASIC26.32■■□□□ 1.8
COL16A1Q07092 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL16A1Q07092 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL16A1Q07092 KRT8P11-201ENST00000409686 1436 ntBASIC26.32■■□□□ 1.8
COL16A1Q07092 TBC1D3P2-202ENST00000577902 1649 ntBASIC26.32■■□□□ 1.8
COL16A1Q07092 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL16A1Q07092 LINC01465-201ENST00000408887 1940 ntBASIC26.32■■□□□ 1.8
COL16A1Q07092 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL16A1Q07092 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL16A1Q07092 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
COL16A1Q07092 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC26.32■■□□□ 1.8
COL16A1Q07092 PPIE-208ENST00000470213 927 ntTSL 3 BASIC26.32■■□□□ 1.8
COL16A1Q07092 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC26.32■■□□□ 1.8
COL16A1Q07092 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC26.31■■□□□ 1.8
COL16A1Q07092 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC26.31■■□□□ 1.8
COL16A1Q07092 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC26.31■■□□□ 1.8
COL16A1Q07092 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL16A1Q07092 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC26.31■■□□□ 1.8
COL16A1Q07092 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC26.31■■□□□ 1.8
COL16A1Q07092 ABR-217ENST00000572441 563 ntTSL 4 BASIC26.31■■□□□ 1.8
COL16A1Q07092 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL16A1Q07092 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL16A1Q07092 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL16A1Q07092 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC26.3■■□□□ 1.8
COL16A1Q07092 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
COL16A1Q07092 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COL16A1Q07092 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC26.3■■□□□ 1.8
COL16A1Q07092 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC26.3■■□□□ 1.8
COL16A1Q07092 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC26.3■■□□□ 1.8
COL16A1Q07092 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL16A1Q07092 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC26.3■■□□□ 1.8
COL16A1Q07092 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC26.3■■□□□ 1.8
COL16A1Q07092 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL16A1Q07092 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC26.29■■□□□ 1.8
COL16A1Q07092 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL16A1Q07092 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.29■■□□□ 1.8
COL16A1Q07092 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL16A1Q07092 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL16A1Q07092 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL16A1Q07092 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC26.29■■□□□ 1.8
COL16A1Q07092 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC26.29■■□□□ 1.8
COL16A1Q07092 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC26.29■■□□□ 1.8
COL16A1Q07092 AL353801.3-201ENST00000609898 542 ntBASIC26.29■■□□□ 1.8
COL16A1Q07092 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL16A1Q07092 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL16A1Q07092 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL16A1Q07092 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC26.28■■□□□ 1.8
COL16A1Q07092 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC26.28■■□□□ 1.8
COL16A1Q07092 HLA-F-220ENST00000434407 884 ntBASIC26.28■■□□□ 1.8
COL16A1Q07092 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
COL16A1Q07092 KRT18P58-201ENST00000527480 1120 ntBASIC26.28■■□□□ 1.8
COL16A1Q07092 SPEG-225ENST00000617028 815 ntTSL 5 BASIC26.28■■□□□ 1.8
COL16A1Q07092 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL16A1Q07092 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL16A1Q07092 AC022898.2-201ENST00000616822 1312 ntBASIC26.28■■□□□ 1.8
COL16A1Q07092 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL16A1Q07092 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL16A1Q07092 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
COL16A1Q07092 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL16A1Q07092 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC26.28■■□□□ 1.8
COL16A1Q07092 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC26.28■■□□□ 1.8
COL16A1Q07092 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL16A1Q07092 AP001005.1-201ENST00000571755 1248 ntBASIC26.28■■□□□ 1.8
COL16A1Q07092 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC26.28■■□□□ 1.8
COL16A1Q07092 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
COL16A1Q07092 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC26.28■■□□□ 1.8
COL16A1Q07092 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.28■■□□□ 1.8
COL16A1Q07092 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.28■■□□□ 1.8
COL16A1Q07092 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL16A1Q07092 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL16A1Q07092 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.27■■□□□ 1.8
COL16A1Q07092 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC26.27■■□□□ 1.8
COL16A1Q07092 AL117328.2-201ENST00000624617 1940 ntBASIC26.27■■□□□ 1.8
COL16A1Q07092 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL16A1Q07092 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL16A1Q07092 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
COL16A1Q07092 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
COL16A1Q07092 AC079602.3-201ENST00000623931 403 ntBASIC26.27■■□□□ 1.8
COL16A1Q07092 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
COL16A1Q07092 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
COL16A1Q07092 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC26.27■■□□□ 1.8
COL16A1Q07092 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC26.26■■□□□ 1.8
COL16A1Q07092 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
COL16A1Q07092 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC26.26■■□□□ 1.79
COL16A1Q07092 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
COL16A1Q07092 ABR-204ENST00000543210 1049 ntTSL 2 BASIC26.26■■□□□ 1.79
COL16A1Q07092 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL16A1Q07092 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.26■■□□□ 1.79
COL16A1Q07092 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL16A1Q07092 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL16A1Q07092 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
COL16A1Q07092 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms