Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.81■□□□□ 0.92
SOX4Q06945 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SOX4Q06945 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SOX4Q06945 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SOX4Q06945 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SOX4Q06945 AC096733.2-201ENST00000609937 1394 ntBASIC20.81■□□□□ 0.92
SOX4Q06945 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.81■□□□□ 0.92
SOX4Q06945 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.81■□□□□ 0.92
SOX4Q06945 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.8■□□□□ 0.92
SOX4Q06945 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.8■□□□□ 0.92
SOX4Q06945 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SOX4Q06945 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX4Q06945 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SOX4Q06945 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX4Q06945 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX4Q06945 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX4Q06945 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX4Q06945 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.8■□□□□ 0.92
SOX4Q06945 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.8■□□□□ 0.92
SOX4Q06945 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.8■□□□□ 0.92
SOX4Q06945 MFAP1P1-201ENST00000442257 1255 ntBASIC20.8■□□□□ 0.92
SOX4Q06945 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX4Q06945 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.8■□□□□ 0.92
SOX4Q06945 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX4Q06945 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX4Q06945 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SOX4Q06945 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX4Q06945 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.8■□□□□ 0.92
SOX4Q06945 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.8■□□□□ 0.92
SOX4Q06945 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX4Q06945 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX4Q06945 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SOX4Q06945 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SOX4Q06945 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX4Q06945 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.79■□□□□ 0.92
SOX4Q06945 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.79■□□□□ 0.92
SOX4Q06945 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.79■□□□□ 0.92
SOX4Q06945 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
SOX4Q06945 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.79■□□□□ 0.92
SOX4Q06945 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
SOX4Q06945 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.79■□□□□ 0.92
SOX4Q06945 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SOX4Q06945 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX4Q06945 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
SOX4Q06945 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SOX4Q06945 AC125437.2-201ENST00000625180 2167 ntBASIC20.79■□□□□ 0.92
SOX4Q06945 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SOX4Q06945 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.79■□□□□ 0.92
SOX4Q06945 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX4Q06945 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.78■□□□□ 0.92
SOX4Q06945 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOX4Q06945 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SOX4Q06945 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX4Q06945 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.78■□□□□ 0.92
SOX4Q06945 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX4Q06945 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.78■□□□□ 0.92
SOX4Q06945 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX4Q06945 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.78■□□□□ 0.92
SOX4Q06945 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX4Q06945 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SOX4Q06945 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
SOX4Q06945 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX4Q06945 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX4Q06945 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX4Q06945 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.78■□□□□ 0.92
SOX4Q06945 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX4Q06945 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX4Q06945 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX4Q06945 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SOX4Q06945 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.78■□□□□ 0.92
SOX4Q06945 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
SOX4Q06945 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.78■□□□□ 0.92
SOX4Q06945 RN7SL850P-201ENST00000579959 291 ntBASIC20.78■□□□□ 0.92
SOX4Q06945 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOX4Q06945 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.78■□□□□ 0.92
SOX4Q06945 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SOX4Q06945 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX4Q06945 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.78■□□□□ 0.92
SOX4Q06945 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SOX4Q06945 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX4Q06945 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX4Q06945 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX4Q06945 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX4Q06945 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX4Q06945 AC104417.2-201ENST00000562989 1793 ntBASIC20.77■□□□□ 0.92
SOX4Q06945 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.77■□□□□ 0.92
SOX4Q06945 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.77■□□□□ 0.92
SOX4Q06945 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX4Q06945 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SOX4Q06945 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.77■□□□□ 0.92
SOX4Q06945 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX4Q06945 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX4Q06945 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
SOX4Q06945 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.77■□□□□ 0.92
SOX4Q06945 C2orf69P3-201ENST00000565542 1120 ntBASIC20.77■□□□□ 0.92
SOX4Q06945 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX4Q06945 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SOX4Q06945 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX4Q06945 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.77■□□□□ 0.92
SOX4Q06945 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms