Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H3AP68431 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H3AP68431 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H3AP68431 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 KRT17P3-201ENST00000420566 1262 ntBASIC16.98■□□□□ 0.31
HIST1H3AP68431 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H3AP68431 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H3AP68431 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 MTDHP1-201ENST00000605323 784 ntBASIC16.98■□□□□ 0.31
HIST1H3AP68431 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H3AP68431 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST1H3AP68431 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H3AP68431 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HIST1H3AP68431 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H3AP68431 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H3AP68431 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST1H3AP68431 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H3AP68431 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H3AP68431 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H3AP68431 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H3AP68431 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H3AP68431 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.97■□□□□ 0.31
HIST1H3AP68431 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H3AP68431 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST1H3AP68431 PRKY-204ENST00000533551 1019 ntBASIC16.97■□□□□ 0.31
HIST1H3AP68431 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.97■□□□□ 0.31
HIST1H3AP68431 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST1H3AP68431 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H3AP68431 AC069544.1-201ENST00000609399 999 ntBASIC16.97■□□□□ 0.31
HIST1H3AP68431 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST1H3AP68431 AC018445.3-201ENST00000624177 1945 ntBASIC16.97■□□□□ 0.31
HIST1H3AP68431 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST1H3AP68431 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HIST1H3AP68431 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H3AP68431 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HIST1H3AP68431 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H3AP68431 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H3AP68431 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
HIST1H3AP68431 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H3AP68431 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H3AP68431 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.96■□□□□ 0.31
HIST1H3AP68431 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.96■□□□□ 0.31
HIST1H3AP68431 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HIST1H3AP68431 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H3AP68431 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H3AP68431 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
HIST1H3AP68431 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.96■□□□□ 0.31
HIST1H3AP68431 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.96■□□□□ 0.31
HIST1H3AP68431 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H3AP68431 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H3AP68431 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H3AP68431 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
HIST1H3AP68431 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H3AP68431 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.96■□□□□ 0.31
HIST1H3AP68431 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.96■□□□□ 0.31
HIST1H3AP68431 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.96■□□□□ 0.31
HIST1H3AP68431 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H3AP68431 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HIST1H3AP68431 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H3AP68431 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H3AP68431 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HIST1H3AP68431 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HIST1H3AP68431 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HIST1H3AP68431 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H3AP68431 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H3AP68431 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H3AP68431 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 NBPF21P-201ENST00000425093 1451 ntBASIC16.95■□□□□ 0.3
HIST1H3AP68431 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H3AP68431 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H3AP68431 AC233263.1-201ENST00000578059 224 ntBASIC16.95■□□□□ 0.3
HIST1H3AP68431 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.95■□□□□ 0.3
HIST1H3AP68431 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H3AP68431 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H3AP68431 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H3AP68431 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms