Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 LINC01465-201ENST00000408887 1940 ntBASIC17.53■□□□□ 0.4
RPS4XP62701 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RPS4XP62701 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4XP62701 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.53■□□□□ 0.4
RPS4XP62701 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.53■□□□□ 0.4
RPS4XP62701 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.53■□□□□ 0.4
RPS4XP62701 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.53■□□□□ 0.4
RPS4XP62701 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4XP62701 MIR718-201ENST00000390190 70 ntBASIC17.53■□□□□ 0.4
RPS4XP62701 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4XP62701 AL596275.1-201ENST00000423464 877 ntBASIC17.53■□□□□ 0.4
RPS4XP62701 C1QBPP2-201ENST00000528754 825 ntBASIC17.53■□□□□ 0.4
RPS4XP62701 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.53■□□□□ 0.4
RPS4XP62701 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.53■□□□□ 0.4
RPS4XP62701 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4XP62701 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4XP62701 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
RPS4XP62701 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4XP62701 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4XP62701 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RPS4XP62701 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4XP62701 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4XP62701 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4XP62701 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4XP62701 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.53■□□□□ 0.4
RPS4XP62701 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.53■□□□□ 0.4
RPS4XP62701 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS4XP62701 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
RPS4XP62701 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RPS4XP62701 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4XP62701 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RPS4XP62701 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4XP62701 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RPS4XP62701 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.52■□□□□ 0.4
RPS4XP62701 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.52■□□□□ 0.4
RPS4XP62701 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4XP62701 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4XP62701 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4XP62701 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4XP62701 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4XP62701 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RPS4XP62701 YBX1P10-201ENST00000444752 975 ntBASIC17.52■□□□□ 0.4
RPS4XP62701 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.52■□□□□ 0.4
RPS4XP62701 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.52■□□□□ 0.4
RPS4XP62701 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.52■□□□□ 0.4
RPS4XP62701 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.52■□□□□ 0.4
RPS4XP62701 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4XP62701 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.52■□□□□ 0.4
RPS4XP62701 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4XP62701 SOX15-203ENST00000570788 1093 ntBASIC17.52■□□□□ 0.4
RPS4XP62701 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.52■□□□□ 0.4
RPS4XP62701 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS4XP62701 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RPS4XP62701 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4XP62701 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4XP62701 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.52■□□□□ 0.39
RPS4XP62701 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.52■□□□□ 0.39
RPS4XP62701 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4XP62701 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4XP62701 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RPS4XP62701 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4XP62701 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RPS4XP62701 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4XP62701 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4XP62701 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4XP62701 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4XP62701 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4XP62701 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RPS4XP62701 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
RPS4XP62701 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4XP62701 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RPS4XP62701 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4XP62701 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4XP62701 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS4XP62701 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4XP62701 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4XP62701 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.51■□□□□ 0.39
RPS4XP62701 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.51■□□□□ 0.39
RPS4XP62701 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.51■□□□□ 0.39
RPS4XP62701 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RPS4XP62701 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RPS4XP62701 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RPS4XP62701 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.51■□□□□ 0.39
RPS4XP62701 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.51■□□□□ 0.39
RPS4XP62701 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.51■□□□□ 0.39
RPS4XP62701 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.51■□□□□ 0.39
RPS4XP62701 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4XP62701 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4XP62701 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS4XP62701 AP006587.1-201ENST00000534129 1502 ntBASIC17.51■□□□□ 0.39
RPS4XP62701 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RPS4XP62701 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4XP62701 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms