Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LSM3P62310 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.51■□□□□ 0.39
LSM3P62310 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM3P62310 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
LSM3P62310 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.5■□□□□ 0.39
LSM3P62310 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.5■□□□□ 0.39
LSM3P62310 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LSM3P62310 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.5■□□□□ 0.39
LSM3P62310 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.5■□□□□ 0.39
LSM3P62310 AC105233.4-201ENST00000642045 216 ntBASIC17.5■□□□□ 0.39
LSM3P62310 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LSM3P62310 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.5■□□□□ 0.39
LSM3P62310 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LSM3P62310 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.5■□□□□ 0.39
LSM3P62310 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM3P62310 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
LSM3P62310 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LSM3P62310 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSM3P62310 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSM3P62310 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
LSM3P62310 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSM3P62310 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM3P62310 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM3P62310 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.49■□□□□ 0.39
LSM3P62310 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LSM3P62310 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM3P62310 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LSM3P62310 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.49■□□□□ 0.39
LSM3P62310 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.49■□□□□ 0.39
LSM3P62310 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.49■□□□□ 0.39
LSM3P62310 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.49■□□□□ 0.39
LSM3P62310 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LSM3P62310 AL512631.2-201ENST00000604634 923 ntBASIC17.49■□□□□ 0.39
LSM3P62310 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSM3P62310 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM3P62310 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSM3P62310 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM3P62310 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LSM3P62310 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LSM3P62310 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM3P62310 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LSM3P62310 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM3P62310 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 AL031598.1-201ENST00000561511 1773 ntBASIC17.48■□□□□ 0.39
LSM3P62310 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.48■□□□□ 0.39
LSM3P62310 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.48■□□□□ 0.39
LSM3P62310 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 FP475955.4-201ENST00000623131 1990 ntBASIC17.48■□□□□ 0.39
LSM3P62310 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM3P62310 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM3P62310 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LSM3P62310 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM3P62310 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
LSM3P62310 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.48■□□□□ 0.39
LSM3P62310 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM3P62310 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM3P62310 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.48■□□□□ 0.39
LSM3P62310 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM3P62310 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM3P62310 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LSM3P62310 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM3P62310 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM3P62310 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LSM3P62310 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM3P62310 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LSM3P62310 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM3P62310 AC009299.2-201ENST00000482477 511 ntBASIC17.47■□□□□ 0.39
LSM3P62310 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LSM3P62310 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms