Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.44■□□□□ 0.86
USP46P62068 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.44■□□□□ 0.86
USP46P62068 LINC01465-201ENST00000408887 1940 ntBASIC20.44■□□□□ 0.86
USP46P62068 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
USP46P62068 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
USP46P62068 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.44■□□□□ 0.86
USP46P62068 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP46P62068 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP46P62068 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.44■□□□□ 0.86
USP46P62068 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP46P62068 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP46P62068 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP46P62068 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.44■□□□□ 0.86
USP46P62068 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP46P62068 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.44■□□□□ 0.86
USP46P62068 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP46P62068 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP46P62068 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP46P62068 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP46P62068 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP46P62068 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.43■□□□□ 0.86
USP46P62068 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP46P62068 LINC01023-201ENST00000606054 436 ntBASIC20.43■□□□□ 0.86
USP46P62068 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.43■□□□□ 0.86
USP46P62068 AC131212.4-201ENST00000623606 975 ntBASIC20.43■□□□□ 0.86
USP46P62068 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP46P62068 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP46P62068 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.43■□□□□ 0.86
USP46P62068 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP46P62068 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP46P62068 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
USP46P62068 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.42■□□□□ 0.86
USP46P62068 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
USP46P62068 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
USP46P62068 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.42■□□□□ 0.86
USP46P62068 AC008040.2-201ENST00000461049 708 ntBASIC20.42■□□□□ 0.86
USP46P62068 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.42■□□□□ 0.86
USP46P62068 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.42■□□□□ 0.86
USP46P62068 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.42■□□□□ 0.86
USP46P62068 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
USP46P62068 AC097493.4-201ENST00000641197 219 ntBASIC20.42■□□□□ 0.86
USP46P62068 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
USP46P62068 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
USP46P62068 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
USP46P62068 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.42■□□□□ 0.86
USP46P62068 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
USP46P62068 FSCN1P1-201ENST00000568912 1481 ntBASIC20.42■□□□□ 0.86
USP46P62068 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.42■□□□□ 0.86
USP46P62068 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP46P62068 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.42■□□□□ 0.86
USP46P62068 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
USP46P62068 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP46P62068 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
USP46P62068 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP46P62068 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.41■□□□□ 0.86
USP46P62068 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP46P62068 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP46P62068 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.41■□□□□ 0.86
USP46P62068 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.41■□□□□ 0.86
USP46P62068 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP46P62068 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
USP46P62068 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.41■□□□□ 0.86
USP46P62068 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.41■□□□□ 0.86
USP46P62068 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.41■□□□□ 0.86
USP46P62068 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
USP46P62068 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP46P62068 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP46P62068 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP46P62068 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.41■□□□□ 0.86
USP46P62068 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
USP46P62068 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
USP46P62068 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP46P62068 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP46P62068 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP46P62068 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.4■□□□□ 0.86
USP46P62068 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP46P62068 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.4■□□□□ 0.86
USP46P62068 CYP2D8P-201ENST00000433633 1490 ntBASIC20.4■□□□□ 0.86
USP46P62068 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP46P62068 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.4■□□□□ 0.86
USP46P62068 RCC2P6-201ENST00000526625 1557 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms