Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLDN20P56880 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN20P56880 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN20P56880 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN20P56880 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.8■□□□□ 0.44
CLDN20P56880 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN20P56880 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.8■□□□□ 0.44
CLDN20P56880 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN20P56880 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN20P56880 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN20P56880 AL691432.2-201ENST00000607222 2038 ntBASIC17.8■□□□□ 0.44
CLDN20P56880 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 AC018553.1-201ENST00000616682 1458 ntBASIC17.8■□□□□ 0.44
CLDN20P56880 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CLDN20P56880 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN20P56880 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN20P56880 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLDN20P56880 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CLDN20P56880 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CLDN20P56880 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN20P56880 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CLDN20P56880 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CLDN20P56880 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 AC133681.1-201ENST00000465482 601 ntBASIC17.79■□□□□ 0.44
CLDN20P56880 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.79■□□□□ 0.44
CLDN20P56880 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN20P56880 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN20P56880 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLDN20P56880 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN20P56880 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN20P56880 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN20P56880 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN20P56880 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN20P56880 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN20P56880 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN20P56880 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLDN20P56880 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN20P56880 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN20P56880 UBE2SP1-201ENST00000450587 669 ntBASIC17.78■□□□□ 0.44
CLDN20P56880 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CLDN20P56880 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN20P56880 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN20P56880 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN20P56880 AC110285.5-201ENST00000611501 352 ntBASIC17.78■□□□□ 0.44
CLDN20P56880 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN20P56880 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN20P56880 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN20P56880 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLDN20P56880 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN20P56880 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLDN20P56880 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN20P56880 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN20P56880 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN20P56880 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN20P56880 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLDN20P56880 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN20P56880 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN20P56880 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN20P56880 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN20P56880 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN20P56880 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLDN20P56880 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN20P56880 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN20P56880 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN20P56880 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN20P56880 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLDN20P56880 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLDN20P56880 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN20P56880 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN20P56880 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLDN20P56880 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN20P56880 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN20P56880 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN20P56880 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN20P56880 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN20P56880 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN20P56880 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN20P56880 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN20P56880 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN20P56880 TFP1-202ENST00000475455 1573 ntBASIC17.77■□□□□ 0.44
CLDN20P56880 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN20P56880 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms