Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN2P51788 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLCN2P51788 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN2P51788 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN2P51788 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN2P51788 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN2P51788 ESRRAP1-201ENST00000400596 1257 ntBASIC18.78■□□□□ 0.6
CLCN2P51788 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.78■□□□□ 0.6
CLCN2P51788 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCN2P51788 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.78■□□□□ 0.6
CLCN2P51788 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN2P51788 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCN2P51788 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CLCN2P51788 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCN2P51788 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN2P51788 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN2P51788 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN2P51788 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCN2P51788 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN2P51788 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CLCN2P51788 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLCN2P51788 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLCN2P51788 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN2P51788 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN2P51788 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN2P51788 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.77■□□□□ 0.6
CLCN2P51788 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCN2P51788 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.77■□□□□ 0.6
CLCN2P51788 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN2P51788 AC026366.1-201ENST00000488803 879 ntBASIC18.77■□□□□ 0.6
CLCN2P51788 AP003097.1-201ENST00000530657 1135 ntBASIC18.77■□□□□ 0.6
CLCN2P51788 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.77■□□□□ 0.6
CLCN2P51788 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN2P51788 TMEM191A-211ENST00000637163 1067 ntBASIC18.77■□□□□ 0.6
CLCN2P51788 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN2P51788 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN2P51788 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLCN2P51788 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCN2P51788 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLCN2P51788 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CLCN2P51788 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CLCN2P51788 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLCN2P51788 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CLCN2P51788 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN2P51788 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN2P51788 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.76■□□□□ 0.59
CLCN2P51788 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.76■□□□□ 0.59
CLCN2P51788 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLCN2P51788 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.76■□□□□ 0.59
CLCN2P51788 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLCN2P51788 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN2P51788 BX119927.1-201ENST00000636596 1552 ntBASIC18.76■□□□□ 0.59
CLCN2P51788 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN2P51788 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN2P51788 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN2P51788 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN2P51788 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN2P51788 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN2P51788 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.75■□□□□ 0.59
CLCN2P51788 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.75■□□□□ 0.59
CLCN2P51788 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.75■□□□□ 0.59
CLCN2P51788 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN2P51788 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN2P51788 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN2P51788 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN2P51788 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN2P51788 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN2P51788 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.75■□□□□ 0.59
CLCN2P51788 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN2P51788 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN2P51788 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLCN2P51788 AL390719.1-204ENST00000412397 1219 ntBASIC18.75■□□□□ 0.59
CLCN2P51788 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN2P51788 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN2P51788 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.75■□□□□ 0.59
CLCN2P51788 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.75■□□□□ 0.59
CLCN2P51788 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN2P51788 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN2P51788 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN2P51788 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN2P51788 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN2P51788 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN2P51788 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.75■□□□□ 0.59
CLCN2P51788 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms