Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.56■■□□□ 1.04
CPT1AP50416 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPT1AP50416 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CPT1AP50416 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.56■■□□□ 1.04
CPT1AP50416 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CPT1AP50416 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.56■■□□□ 1.04
CPT1AP50416 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPT1AP50416 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPT1AP50416 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.56■■□□□ 1.04
CPT1AP50416 AP000550.4-202ENST00000639755 178 ntBASIC21.56■■□□□ 1.04
CPT1AP50416 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.56■■□□□ 1.04
CPT1AP50416 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPT1AP50416 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPT1AP50416 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPT1AP50416 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPT1AP50416 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPT1AP50416 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
CPT1AP50416 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPT1AP50416 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.55■■□□□ 1.04
CPT1AP50416 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.55■■□□□ 1.04
CPT1AP50416 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.55■■□□□ 1.04
CPT1AP50416 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPT1AP50416 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CPT1AP50416 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPT1AP50416 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPT1AP50416 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPT1AP50416 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.55■■□□□ 1.04
CPT1AP50416 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPT1AP50416 PRSS44-201ENST00000515154 1146 ntBASIC21.55■■□□□ 1.04
CPT1AP50416 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.55■■□□□ 1.04
CPT1AP50416 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.55■■□□□ 1.04
CPT1AP50416 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.55■■□□□ 1.04
CPT1AP50416 AL121956.5-201ENST00000625261 221 ntBASIC21.55■■□□□ 1.04
CPT1AP50416 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.55■■□□□ 1.04
CPT1AP50416 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPT1AP50416 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.55■■□□□ 1.04
CPT1AP50416 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CPT1AP50416 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CPT1AP50416 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPT1AP50416 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CPT1AP50416 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPT1AP50416 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPT1AP50416 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CPT1AP50416 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPT1AP50416 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPT1AP50416 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPT1AP50416 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPT1AP50416 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPT1AP50416 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPT1AP50416 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPT1AP50416 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.54■■□□□ 1.04
CPT1AP50416 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.54■■□□□ 1.04
CPT1AP50416 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPT1AP50416 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.54■■□□□ 1.04
CPT1AP50416 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPT1AP50416 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CPT1AP50416 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.54■■□□□ 1.04
CPT1AP50416 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CPT1AP50416 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPT1AP50416 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPT1AP50416 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPT1AP50416 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.54■■□□□ 1.04
CPT1AP50416 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPT1AP50416 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.54■■□□□ 1.04
CPT1AP50416 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.53■■□□□ 1.04
CPT1AP50416 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.53■■□□□ 1.04
CPT1AP50416 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPT1AP50416 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CPT1AP50416 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPT1AP50416 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPT1AP50416 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CPT1AP50416 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPT1AP50416 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.53■■□□□ 1.04
CPT1AP50416 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.53■■□□□ 1.04
CPT1AP50416 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPT1AP50416 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.53■■□□□ 1.04
CPT1AP50416 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.53■■□□□ 1.04
CPT1AP50416 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPT1AP50416 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.53■■□□□ 1.04
CPT1AP50416 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPT1AP50416 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CPT1AP50416 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.53■■□□□ 1.04
CPT1AP50416 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPT1AP50416 AL691432.2-201ENST00000607222 2038 ntBASIC21.53■■□□□ 1.04
CPT1AP50416 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CPT1AP50416 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPT1AP50416 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CPT1AP50416 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CPT1AP50416 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPT1AP50416 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPT1AP50416 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CPT1AP50416 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.52■■□□□ 1.04
CPT1AP50416 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.52■■□□□ 1.04
CPT1AP50416 AP000523.1-201ENST00000398242 1049 ntBASIC21.52■■□□□ 1.04
CPT1AP50416 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPT1AP50416 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.52■■□□□ 1.04
CPT1AP50416 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.52■■□□□ 1.04
CPT1AP50416 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPT1AP50416 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.52■■□□□ 1.04
CPT1AP50416 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 250.2 ms