Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.29■□□□□ 0.36
CSNK1A1P48729 KRT8P8-201ENST00000434750 1448 ntBASIC17.29■□□□□ 0.36
CSNK1A1P48729 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.29■□□□□ 0.36
CSNK1A1P48729 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 AC239809.2-201ENST00000415381 517 ntBASIC17.28■□□□□ 0.36
CSNK1A1P48729 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 AC004264.1-201ENST00000608354 794 ntBASIC17.28■□□□□ 0.36
CSNK1A1P48729 AC073648.6-201ENST00000641589 218 ntBASIC17.28■□□□□ 0.36
CSNK1A1P48729 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CSNK1A1P48729 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1A1P48729 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1A1P48729 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CSNK1A1P48729 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CSNK1A1P48729 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.27■□□□□ 0.36
CSNK1A1P48729 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1A1P48729 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1A1P48729 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1A1P48729 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1A1P48729 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1A1P48729 FAM201B-201ENST00000458407 597 ntBASIC17.27■□□□□ 0.36
CSNK1A1P48729 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1A1P48729 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.27■□□□□ 0.36
CSNK1A1P48729 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1A1P48729 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1A1P48729 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.27■□□□□ 0.36
CSNK1A1P48729 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.27■□□□□ 0.36
CSNK1A1P48729 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.27■□□□□ 0.36
CSNK1A1P48729 AL023875.1-201ENST00000640777 796 ntBASIC17.27■□□□□ 0.36
CSNK1A1P48729 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CSNK1A1P48729 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CSNK1A1P48729 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CSNK1A1P48729 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1A1P48729 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1A1P48729 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1A1P48729 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.27■□□□□ 0.35
CSNK1A1P48729 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1A1P48729 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CSNK1A1P48729 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.27■□□□□ 0.35
CSNK1A1P48729 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CSNK1A1P48729 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CSNK1A1P48729 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CSNK1A1P48729 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 AC116562.4-201ENST00000641316 2276 ntBASIC17.26■□□□□ 0.35
CSNK1A1P48729 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CSNK1A1P48729 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 KRASP1-201ENST00000407852 552 ntBASIC17.26■□□□□ 0.35
CSNK1A1P48729 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1A1P48729 AC128676.1-201ENST00000454392 318 ntBASIC17.26■□□□□ 0.35
CSNK1A1P48729 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1A1P48729 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1A1P48729 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK1A1P48729 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1A1P48729 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1A1P48729 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1A1P48729 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1A1P48729 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CSNK1A1P48729 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK1A1P48729 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms