Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.47□□□□□ -0.25
PCP4P48539 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.47□□□□□ -0.25
PCP4P48539 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.47□□□□□ -0.25
PCP4P48539 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.47□□□□□ -0.25
PCP4P48539 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCP4P48539 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 PCDHB19P-201ENST00000570871 2371 ntBASIC13.46□□□□□ -0.25
PCP4P48539 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 TUB-203ENST00000534099 1759 ntTSL 2 BASIC13.46□□□□□ -0.25
PCP4P48539 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.46□□□□□ -0.25
PCP4P48539 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.46□□□□□ -0.25
PCP4P48539 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
PCP4P48539 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
PCP4P48539 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PCP4P48539 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
PCP4P48539 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
PCP4P48539 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PCP4P48539 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
PCP4P48539 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PCP4P48539 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PCP4P48539 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PCP4P48539 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
PCP4P48539 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
PCP4P48539 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.46□□□□□ -0.26
PCP4P48539 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.45□□□□□ -0.26
PCP4P48539 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.45□□□□□ -0.26
PCP4P48539 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.45□□□□□ -0.26
PCP4P48539 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.45□□□□□ -0.26
PCP4P48539 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PCP4P48539 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PCP4P48539 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PCP4P48539 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 BICD1-207ENST00000551848 1962 ntBASIC13.45□□□□□ -0.26
PCP4P48539 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.45□□□□□ -0.26
PCP4P48539 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
PCP4P48539 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.45□□□□□ -0.26
PCP4P48539 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
PCP4P48539 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.45□□□□□ -0.26
PCP4P48539 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCP4P48539 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.44□□□□□ -0.26
PCP4P48539 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.44□□□□□ -0.26
PCP4P48539 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
PCP4P48539 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
PCP4P48539 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
PCP4P48539 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
PCP4P48539 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
PCP4P48539 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCP4P48539 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms