Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL15A1P39059 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL15A1P39059 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL15A1P39059 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL15A1P39059 PCED1CP-201ENST00000419887 785 ntBASIC24.67■■□□□ 1.54
COL15A1P39059 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC24.67■■□□□ 1.54
COL15A1P39059 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC24.67■■□□□ 1.54
COL15A1P39059 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL15A1P39059 KRT18P56-201ENST00000507275 550 ntBASIC24.67■■□□□ 1.54
COL15A1P39059 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.67■■□□□ 1.54
COL15A1P39059 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.67■■□□□ 1.54
COL15A1P39059 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.67■■□□□ 1.54
COL15A1P39059 AL441883.1-201ENST00000566170 1045 ntBASIC24.67■■□□□ 1.54
COL15A1P39059 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL15A1P39059 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC24.67■■□□□ 1.54
COL15A1P39059 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.67■■□□□ 1.54
COL15A1P39059 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC24.67■■□□□ 1.54
COL15A1P39059 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC24.67■■□□□ 1.54
COL15A1P39059 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL15A1P39059 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL15A1P39059 LINC01465-201ENST00000408887 1940 ntBASIC24.67■■□□□ 1.54
COL15A1P39059 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC24.67■■□□□ 1.54
COL15A1P39059 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL15A1P39059 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL15A1P39059 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL15A1P39059 MOK-225ENST00000522867 1883 ntTSL 5 BASIC24.67■■□□□ 1.54
COL15A1P39059 AP001271.2-201ENST00000624018 1556 ntBASIC24.67■■□□□ 1.54
COL15A1P39059 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.67■■□□□ 1.54
COL15A1P39059 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.67■■□□□ 1.54
COL15A1P39059 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC24.67■■□□□ 1.54
COL15A1P39059 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24.67■■□□□ 1.54
COL15A1P39059 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC24.67■■□□□ 1.54
COL15A1P39059 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.67■■□□□ 1.54
COL15A1P39059 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
COL15A1P39059 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.67■■□□□ 1.54
COL15A1P39059 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL15A1P39059 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL15A1P39059 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL15A1P39059 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL15A1P39059 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL15A1P39059 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
COL15A1P39059 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL15A1P39059 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24.66■■□□□ 1.54
COL15A1P39059 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL15A1P39059 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC24.66■■□□□ 1.54
COL15A1P39059 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL15A1P39059 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
COL15A1P39059 HOMER2P1-201ENST00000455653 964 ntBASIC24.66■■□□□ 1.54
COL15A1P39059 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.66■■□□□ 1.54
COL15A1P39059 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.66■■□□□ 1.54
COL15A1P39059 AL512604.3-201ENST00000569583 964 ntBASIC24.66■■□□□ 1.54
COL15A1P39059 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC24.66■■□□□ 1.54
COL15A1P39059 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC24.66■■□□□ 1.54
COL15A1P39059 AC008622.2-201ENST00000617006 1229 ntBASIC24.66■■□□□ 1.54
COL15A1P39059 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL15A1P39059 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.65■■□□□ 1.54
COL15A1P39059 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.65■■□□□ 1.54
COL15A1P39059 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL15A1P39059 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL15A1P39059 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL15A1P39059 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL15A1P39059 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL15A1P39059 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL15A1P39059 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL15A1P39059 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL15A1P39059 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC24.65■■□□□ 1.54
COL15A1P39059 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL15A1P39059 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC24.65■■□□□ 1.54
COL15A1P39059 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL15A1P39059 AP003041.3-201ENST00000527151 707 ntBASIC24.65■■□□□ 1.54
COL15A1P39059 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC24.65■■□□□ 1.54
COL15A1P39059 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.65■■□□□ 1.54
COL15A1P39059 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC24.65■■□□□ 1.54
COL15A1P39059 AL121894.2-201ENST00000602977 491 ntBASIC24.65■■□□□ 1.54
COL15A1P39059 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.65■■□□□ 1.54
COL15A1P39059 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL15A1P39059 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL15A1P39059 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
COL15A1P39059 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.64■■□□□ 1.54
COL15A1P39059 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL15A1P39059 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
COL15A1P39059 IER3-202ENST00000376377 1350 ntBASIC24.64■■□□□ 1.54
COL15A1P39059 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL15A1P39059 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL15A1P39059 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
COL15A1P39059 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL15A1P39059 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.64■■□□□ 1.53
COL15A1P39059 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.64■■□□□ 1.53
COL15A1P39059 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.64■■□□□ 1.53
COL15A1P39059 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL15A1P39059 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL15A1P39059 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.64■■□□□ 1.53
COL15A1P39059 KRT8P41-201ENST00000533985 1514 ntBASIC24.64■■□□□ 1.53
COL15A1P39059 BET1L-202ENST00000332865 533 ntTSL 5 BASIC24.64■■□□□ 1.53
COL15A1P39059 AL671277.2-201ENST00000458060 996 ntBASIC24.64■■□□□ 1.53
COL15A1P39059 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC24.64■■□□□ 1.53
COL15A1P39059 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
COL15A1P39059 CKBP1-201ENST00000565489 1086 ntBASIC24.64■■□□□ 1.53
COL15A1P39059 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.53
COL15A1P39059 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms