Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.5■□□□□ 0.87
CTNNA1P35221 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.5■□□□□ 0.87
CTNNA1P35221 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTNNA1P35221 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.5■□□□□ 0.87
CTNNA1P35221 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CTNNA1P35221 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNNA1P35221 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNNA1P35221 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CTNNA1P35221 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNNA1P35221 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CTNNA1P35221 BX276092.2-201ENST00000417668 665 ntBASIC20.49■□□□□ 0.87
CTNNA1P35221 AC073210.2-201ENST00000430369 194 ntBASIC20.49■□□□□ 0.87
CTNNA1P35221 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTNNA1P35221 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNNA1P35221 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNNA1P35221 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNNA1P35221 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.49■□□□□ 0.87
CTNNA1P35221 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTNNA1P35221 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNNA1P35221 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNNA1P35221 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTNNA1P35221 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.49■□□□□ 0.87
CTNNA1P35221 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.49■□□□□ 0.87
CTNNA1P35221 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CTNNA1P35221 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.49■□□□□ 0.87
CTNNA1P35221 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNNA1P35221 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CTNNA1P35221 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.48■□□□□ 0.87
CTNNA1P35221 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTNNA1P35221 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.48■□□□□ 0.87
CTNNA1P35221 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTNNA1P35221 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTNNA1P35221 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTNNA1P35221 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTNNA1P35221 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTNNA1P35221 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CTNNA1P35221 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
CTNNA1P35221 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.48■□□□□ 0.87
CTNNA1P35221 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.48■□□□□ 0.87
CTNNA1P35221 IKBKGP1-201ENST00000612193 1073 ntBASIC20.48■□□□□ 0.87
CTNNA1P35221 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTNNA1P35221 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.48■□□□□ 0.87
CTNNA1P35221 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTNNA1P35221 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CTNNA1P35221 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CTNNA1P35221 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CTNNA1P35221 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
CTNNA1P35221 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
CTNNA1P35221 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTNNA1P35221 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNNA1P35221 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNNA1P35221 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNNA1P35221 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.47■□□□□ 0.87
CTNNA1P35221 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNNA1P35221 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNNA1P35221 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNNA1P35221 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.47■□□□□ 0.87
CTNNA1P35221 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNNA1P35221 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CTNNA1P35221 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.47■□□□□ 0.87
CTNNA1P35221 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.47■□□□□ 0.87
CTNNA1P35221 RAP2CP1-201ENST00000605103 478 ntBASIC20.47■□□□□ 0.87
CTNNA1P35221 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CTNNA1P35221 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.47■□□□□ 0.87
CTNNA1P35221 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.47■□□□□ 0.87
CTNNA1P35221 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTNNA1P35221 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CTNNA1P35221 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.47■□□□□ 0.87
CTNNA1P35221 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTNNA1P35221 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTNNA1P35221 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.46■□□□□ 0.87
CTNNA1P35221 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.46■□□□□ 0.87
CTNNA1P35221 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CTNNA1P35221 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTNNA1P35221 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTNNA1P35221 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTNNA1P35221 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.46■□□□□ 0.87
CTNNA1P35221 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTNNA1P35221 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.46■□□□□ 0.87
CTNNA1P35221 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.46■□□□□ 0.87
CTNNA1P35221 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.46■□□□□ 0.87
CTNNA1P35221 MIR663A-201ENST00000385250 93 ntBASIC20.46■□□□□ 0.87
CTNNA1P35221 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CTNNA1P35221 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.46■□□□□ 0.87
CTNNA1P35221 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTNNA1P35221 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.46■□□□□ 0.87
CTNNA1P35221 AC005829.2-201ENST00000571422 1056 ntBASIC20.46■□□□□ 0.87
CTNNA1P35221 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.46■□□□□ 0.87
CTNNA1P35221 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CTNNA1P35221 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CTNNA1P35221 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTNNA1P35221 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTNNA1P35221 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTNNA1P35221 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTNNA1P35221 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.46■□□□□ 0.87
CTNNA1P35221 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.46■□□□□ 0.87
CTNNA1P35221 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CTNNA1P35221 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTNNA1P35221 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.87
CTNNA1P35221 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms