Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN6P29350 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN6P29350 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN6P29350 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN6P29350 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN6P29350 AL161938.1-201ENST00000569833 2180 ntBASIC18.42■□□□□ 0.54
PTPN6P29350 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
PTPN6P29350 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PTPN6P29350 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.42■□□□□ 0.54
PTPN6P29350 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.42■□□□□ 0.54
PTPN6P29350 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.42■□□□□ 0.54
PTPN6P29350 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.42■□□□□ 0.54
PTPN6P29350 UNC93B5-201ENST00000530315 699 ntBASIC18.42■□□□□ 0.54
PTPN6P29350 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PTPN6P29350 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PTPN6P29350 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.42■□□□□ 0.54
PTPN6P29350 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN6P29350 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.42■□□□□ 0.54
PTPN6P29350 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
PTPN6P29350 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PTPN6P29350 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN6P29350 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PTPN6P29350 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.41■□□□□ 0.54
PTPN6P29350 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.41■□□□□ 0.54
PTPN6P29350 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN6P29350 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
PTPN6P29350 PNMA6B-201ENST00000538162 1200 ntBASIC18.41■□□□□ 0.54
PTPN6P29350 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 AL138781.2-201ENST00000617896 1843 ntBASIC18.41■□□□□ 0.54
PTPN6P29350 AC092368.3-202ENST00000574180 1591 ntBASIC18.41■□□□□ 0.54
PTPN6P29350 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
PTPN6P29350 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN6P29350 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PTPN6P29350 TEX21P-204ENST00000641479 1693 ntBASIC18.41■□□□□ 0.54
PTPN6P29350 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 AL049812.1-201ENST00000432563 2267 ntBASIC18.4■□□□□ 0.54
PTPN6P29350 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PTPN6P29350 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
PTPN6P29350 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PTPN6P29350 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN6P29350 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PTPN6P29350 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN6P29350 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN6P29350 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
PTPN6P29350 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.4■□□□□ 0.54
PTPN6P29350 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN6P29350 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN6P29350 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PTPN6P29350 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PTPN6P29350 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN6P29350 AC141586.3-201ENST00000562166 1838 ntBASIC18.39■□□□□ 0.54
PTPN6P29350 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PTPN6P29350 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
PTPN6P29350 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN6P29350 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN6P29350 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN6P29350 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN6P29350 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN6P29350 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms