Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
MMP11P24347 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP11P24347 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP11P24347 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP11P24347 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP11P24347 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP11P24347 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP11P24347 NIFKP9-201ENST00000419265 221 ntBASIC18.45■□□□□ 0.54
MMP11P24347 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP11P24347 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.45■□□□□ 0.54
MMP11P24347 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP11P24347 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
MMP11P24347 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.45■□□□□ 0.54
MMP11P24347 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP11P24347 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MMP11P24347 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP11P24347 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP11P24347 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
MMP11P24347 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP11P24347 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP11P24347 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.45■□□□□ 0.54
MMP11P24347 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
MMP11P24347 AC018553.1-201ENST00000616682 1458 ntBASIC18.45■□□□□ 0.54
MMP11P24347 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP11P24347 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP11P24347 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MMP11P24347 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP11P24347 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MMP11P24347 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP11P24347 AL691432.2-201ENST00000607222 2038 ntBASIC18.44■□□□□ 0.54
MMP11P24347 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.44■□□□□ 0.54
MMP11P24347 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
MMP11P24347 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.44■□□□□ 0.54
MMP11P24347 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.44■□□□□ 0.54
MMP11P24347 KSR1P1-201ENST00000446298 240 ntBASIC18.44■□□□□ 0.54
MMP11P24347 NUDT16P1-203ENST00000513809 620 ntBASIC18.44■□□□□ 0.54
MMP11P24347 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP11P24347 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP11P24347 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP11P24347 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MMP11P24347 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP11P24347 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP11P24347 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP11P24347 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP11P24347 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP11P24347 AC087289.5-201ENST00000586076 3175 ntBASIC18.44■□□□□ 0.54
MMP11P24347 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP11P24347 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.44■□□□□ 0.54
MMP11P24347 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP11P24347 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP11P24347 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP11P24347 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP11P24347 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP11P24347 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP11P24347 PHGDH-210ENST00000641115 1638 ntBASIC18.43■□□□□ 0.54
MMP11P24347 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP11P24347 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP11P24347 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP11P24347 AC087499.1-201ENST00000418141 1075 ntBASIC18.43■□□□□ 0.54
MMP11P24347 YBX1P10-201ENST00000444752 975 ntBASIC18.43■□□□□ 0.54
MMP11P24347 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.43■□□□□ 0.54
MMP11P24347 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.43■□□□□ 0.54
MMP11P24347 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.43■□□□□ 0.54
MMP11P24347 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MMP11P24347 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP11P24347 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP11P24347 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.43■□□□□ 0.54
MMP11P24347 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP11P24347 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP11P24347 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
MMP11P24347 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.42■□□□□ 0.54
MMP11P24347 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MMP11P24347 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
MMP11P24347 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MMP11P24347 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP11P24347 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MMP11P24347 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP11P24347 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MMP11P24347 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
MMP11P24347 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.42■□□□□ 0.54
MMP11P24347 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.42■□□□□ 0.54
MMP11P24347 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.42■□□□□ 0.54
MMP11P24347 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.42■□□□□ 0.54
MMP11P24347 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP11P24347 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP11P24347 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
MMP11P24347 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
MMP11P24347 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms