Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 DUX4L19-201ENST00000557448 1267 ntBASIC20.21■□□□□ 0.83
H2AFXP16104 AL512631.2-201ENST00000604634 923 ntBASIC20.21■□□□□ 0.83
H2AFXP16104 AC105233.4-201ENST00000642045 216 ntBASIC20.21■□□□□ 0.83
H2AFXP16104 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.21■□□□□ 0.83
H2AFXP16104 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 AL162741.1-201ENST00000565563 1558 ntBASIC20.21■□□□□ 0.83
H2AFXP16104 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
H2AFXP16104 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2AFXP16104 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2AFXP16104 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.2■□□□□ 0.82
H2AFXP16104 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.2■□□□□ 0.82
H2AFXP16104 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
H2AFXP16104 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2AFXP16104 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2AFXP16104 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.2■□□□□ 0.82
H2AFXP16104 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.2■□□□□ 0.82
H2AFXP16104 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
H2AFXP16104 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.2■□□□□ 0.82
H2AFXP16104 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
H2AFXP16104 MIR3621-201ENST00000580529 85 ntBASIC20.2■□□□□ 0.82
H2AFXP16104 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.2■□□□□ 0.82
H2AFXP16104 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.2■□□□□ 0.82
H2AFXP16104 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2AFXP16104 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2AFXP16104 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2AFXP16104 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2AFXP16104 AC084018.2-201ENST00000613093 2607 ntBASIC20.2■□□□□ 0.82
H2AFXP16104 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2AFXP16104 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
H2AFXP16104 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
H2AFXP16104 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2AFXP16104 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2AFXP16104 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.19■□□□□ 0.82
H2AFXP16104 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.19■□□□□ 0.82
H2AFXP16104 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
H2AFXP16104 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2AFXP16104 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
H2AFXP16104 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.19■□□□□ 0.82
H2AFXP16104 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.19■□□□□ 0.82
H2AFXP16104 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.19■□□□□ 0.82
H2AFXP16104 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.19■□□□□ 0.82
H2AFXP16104 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.19■□□□□ 0.82
H2AFXP16104 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2AFXP16104 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2AFXP16104 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2AFXP16104 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
H2AFXP16104 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.18■□□□□ 0.82
H2AFXP16104 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.18■□□□□ 0.82
H2AFXP16104 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
H2AFXP16104 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.18■□□□□ 0.82
H2AFXP16104 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.18■□□□□ 0.82
H2AFXP16104 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.18■□□□□ 0.82
H2AFXP16104 BX842568.3-201ENST00000418104 571 ntBASIC20.18■□□□□ 0.82
H2AFXP16104 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.18■□□□□ 0.82
H2AFXP16104 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 AC012354.3-201ENST00000623734 483 ntBASIC20.18■□□□□ 0.82
H2AFXP16104 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.18■□□□□ 0.82
H2AFXP16104 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
H2AFXP16104 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 AC134043.2-201ENST00000624206 2238 ntBASIC20.18■□□□□ 0.82
H2AFXP16104 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.18■□□□□ 0.82
H2AFXP16104 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2AFXP16104 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
H2AFXP16104 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.17■□□□□ 0.82
H2AFXP16104 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.17■□□□□ 0.82
H2AFXP16104 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.17■□□□□ 0.82
H2AFXP16104 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
H2AFXP16104 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
H2AFXP16104 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2AFXP16104 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.17■□□□□ 0.82
H2AFXP16104 AL356652.1-201ENST00000615962 565 ntBASIC20.17■□□□□ 0.82
H2AFXP16104 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms