Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRFP11831 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRFP11831 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SRFP11831 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SRFP11831 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SRFP11831 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRFP11831 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.71■□□□□ 0.75
SRFP11831 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.71■□□□□ 0.75
SRFP11831 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.71■□□□□ 0.75
SRFP11831 BX119927.1-201ENST00000636596 1552 ntBASIC19.71■□□□□ 0.75
SRFP11831 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.71■□□□□ 0.75
SRFP11831 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
SRFP11831 AC092329.2-201ENST00000598402 547 ntBASIC19.71■□□□□ 0.75
SRFP11831 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SRFP11831 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SRFP11831 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 AF106564.1-201ENST00000607058 2553 ntBASIC19.71■□□□□ 0.75
SRFP11831 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRFP11831 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.71■□□□□ 0.75
SRFP11831 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.7■□□□□ 0.74
SRFP11831 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.7■□□□□ 0.74
SRFP11831 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 KRT8P11-201ENST00000409686 1436 ntBASIC19.7■□□□□ 0.74
SRFP11831 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.7■□□□□ 0.74
SRFP11831 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
SRFP11831 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 HBZP1-201ENST00000354915 429 ntBASIC19.7■□□□□ 0.74
SRFP11831 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.7■□□□□ 0.74
SRFP11831 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.7■□□□□ 0.74
SRFP11831 AL645929.1-201ENST00000420084 975 ntBASIC19.7■□□□□ 0.74
SRFP11831 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SRFP11831 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.7■□□□□ 0.74
SRFP11831 AC111152.3-201ENST00000569699 673 ntBASIC19.7■□□□□ 0.74
SRFP11831 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.7■□□□□ 0.74
SRFP11831 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SRFP11831 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.7■□□□□ 0.74
SRFP11831 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.7■□□□□ 0.74
SRFP11831 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRFP11831 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
SRFP11831 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SRFP11831 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.69■□□□□ 0.74
SRFP11831 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.69■□□□□ 0.74
SRFP11831 FDX1P1-201ENST00000449115 551 ntBASIC19.69■□□□□ 0.74
SRFP11831 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.69■□□□□ 0.74
SRFP11831 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.69■□□□□ 0.74
SRFP11831 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
SRFP11831 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
SRFP11831 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SRFP11831 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRFP11831 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.68■□□□□ 0.74
SRFP11831 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SRFP11831 AC004870.1-201ENST00000315132 882 ntBASIC19.68■□□□□ 0.74
SRFP11831 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SRFP11831 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRFP11831 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.68■□□□□ 0.74
SRFP11831 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.68■□□□□ 0.74
SRFP11831 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.68■□□□□ 0.74
SRFP11831 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.68■□□□□ 0.74
SRFP11831 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.68■□□□□ 0.74
SRFP11831 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SRFP11831 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRFP11831 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.68■□□□□ 0.74
SRFP11831 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SRFP11831 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRFP11831 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms