Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.93■■□□□ 1.26
HMGB1P09429 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.93■■□□□ 1.26
HMGB1P09429 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGB1P09429 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
HMGB1P09429 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGB1P09429 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGB1P09429 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGB1P09429 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
HMGB1P09429 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGB1P09429 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.92■■□□□ 1.26
HMGB1P09429 RN7SL471P-201ENST00000580476 299 ntBASIC22.92■■□□□ 1.26
HMGB1P09429 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.92■■□□□ 1.26
HMGB1P09429 AL023875.1-201ENST00000640777 796 ntBASIC22.92■■□□□ 1.26
HMGB1P09429 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.92■■□□□ 1.26
HMGB1P09429 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGB1P09429 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGB1P09429 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGB1P09429 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGB1P09429 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGB1P09429 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.91■■□□□ 1.26
HMGB1P09429 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 BX323043.1-201ENST00000641006 1765 ntBASIC22.91■■□□□ 1.26
HMGB1P09429 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.91■■□□□ 1.26
HMGB1P09429 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.91■■□□□ 1.26
HMGB1P09429 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.91■■□□□ 1.26
HMGB1P09429 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.91■■□□□ 1.26
HMGB1P09429 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 AC239809.2-201ENST00000415381 517 ntBASIC22.91■■□□□ 1.26
HMGB1P09429 AC133681.1-201ENST00000465482 601 ntBASIC22.91■■□□□ 1.26
HMGB1P09429 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 AC006058.3-201ENST00000606217 1069 ntBASIC22.91■■□□□ 1.26
HMGB1P09429 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 AC073648.6-201ENST00000641589 218 ntBASIC22.91■■□□□ 1.26
HMGB1P09429 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
HMGB1P09429 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
HMGB1P09429 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
HMGB1P09429 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
HMGB1P09429 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGB1P09429 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGB1P09429 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.9■■□□□ 1.26
HMGB1P09429 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
HMGB1P09429 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
HMGB1P09429 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
HMGB1P09429 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.9■■□□□ 1.26
HMGB1P09429 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.9■■□□□ 1.26
HMGB1P09429 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGB1P09429 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGB1P09429 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.9■■□□□ 1.26
HMGB1P09429 POU5F1P3-201ENST00000428824 1078 ntBASIC22.9■■□□□ 1.26
HMGB1P09429 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.9■■□□□ 1.26
HMGB1P09429 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGB1P09429 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.9■■□□□ 1.26
HMGB1P09429 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.9■■□□□ 1.26
HMGB1P09429 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
HMGB1P09429 C1QL1P1-201ENST00000568105 661 ntBASIC22.9■■□□□ 1.26
HMGB1P09429 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
HMGB1P09429 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGB1P09429 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
HMGB1P09429 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGB1P09429 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGB1P09429 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.9■■□□□ 1.26
HMGB1P09429 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGB1P09429 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.9■■□□□ 1.26
HMGB1P09429 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
HMGB1P09429 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
HMGB1P09429 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
HMGB1P09429 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
HMGB1P09429 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
HMGB1P09429 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
HMGB1P09429 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
HMGB1P09429 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
HMGB1P09429 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.26
HMGB1P09429 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
HMGB1P09429 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.89■■□□□ 1.25
HMGB1P09429 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
HMGB1P09429 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
HMGB1P09429 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
HMGB1P09429 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HMGB1P09429 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.89■■□□□ 1.25
HMGB1P09429 KRT16P5-201ENST00000455284 522 ntBASIC22.89■■□□□ 1.25
HMGB1P09429 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
HMGB1P09429 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.89■■□□□ 1.25
HMGB1P09429 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.89■■□□□ 1.25
HMGB1P09429 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
HMGB1P09429 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HMGB1P09429 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HMGB1P09429 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
HMGB1P09429 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HMGB1P09429 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
HMGB1P09429 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.89■■□□□ 1.25
HMGB1P09429 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms