Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.4■■□□□ 1.34
CHGBP05060 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CHGBP05060 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHGBP05060 AC104417.2-201ENST00000562989 1793 ntBASIC23.4■■□□□ 1.34
CHGBP05060 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CHGBP05060 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
CHGBP05060 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
CHGBP05060 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
CHGBP05060 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CHGBP05060 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.39■■□□□ 1.34
CHGBP05060 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHGBP05060 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHGBP05060 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.39■■□□□ 1.33
CHGBP05060 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHGBP05060 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.39■■□□□ 1.33
CHGBP05060 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CHGBP05060 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CHGBP05060 KSR1P1-201ENST00000446298 240 ntBASIC23.39■■□□□ 1.33
CHGBP05060 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
CHGBP05060 AC026471.5-201ENST00000615068 467 ntBASIC23.39■■□□□ 1.33
CHGBP05060 REXO1L10P-201ENST00000615707 1290 ntBASIC23.39■■□□□ 1.33
CHGBP05060 AL445675.2-201ENST00000620291 557 ntBASIC23.39■■□□□ 1.33
CHGBP05060 REXO1L12P-201ENST00000622156 912 ntBASIC23.39■■□□□ 1.33
CHGBP05060 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CHGBP05060 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHGBP05060 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.39■■□□□ 1.33
CHGBP05060 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHGBP05060 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHGBP05060 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHGBP05060 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CHGBP05060 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHGBP05060 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CHGBP05060 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHGBP05060 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHGBP05060 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.38■■□□□ 1.33
CHGBP05060 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHGBP05060 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.38■■□□□ 1.33
CHGBP05060 Z85996.1-201ENST00000494644 937 ntBASIC23.38■■□□□ 1.33
CHGBP05060 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.38■■□□□ 1.33
CHGBP05060 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CHGBP05060 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.38■■□□□ 1.33
CHGBP05060 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.38■■□□□ 1.33
CHGBP05060 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHGBP05060 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.37■■□□□ 1.33
CHGBP05060 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.37■■□□□ 1.33
CHGBP05060 AC093484.2-201ENST00000580996 2166 ntBASIC23.37■■□□□ 1.33
CHGBP05060 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHGBP05060 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.37■■□□□ 1.33
CHGBP05060 KRT16P1-201ENST00000399124 1418 ntBASIC23.37■■□□□ 1.33
CHGBP05060 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CHGBP05060 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHGBP05060 AL353807.1-201ENST00000427475 662 ntBASIC23.37■■□□□ 1.33
CHGBP05060 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.37■■□□□ 1.33
CHGBP05060 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.37■■□□□ 1.33
CHGBP05060 AP003071.4-201ENST00000562276 1284 ntBASIC23.37■■□□□ 1.33
CHGBP05060 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.37■■□□□ 1.33
CHGBP05060 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.37■■□□□ 1.33
CHGBP05060 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.37■■□□□ 1.33
CHGBP05060 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.37■■□□□ 1.33
CHGBP05060 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHGBP05060 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CHGBP05060 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHGBP05060 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHGBP05060 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
CHGBP05060 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHGBP05060 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CHGBP05060 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHGBP05060 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHGBP05060 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHGBP05060 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHGBP05060 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHGBP05060 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CHGBP05060 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHGBP05060 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHGBP05060 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHGBP05060 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHGBP05060 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHGBP05060 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHGBP05060 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.36■■□□□ 1.33
CHGBP05060 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHGBP05060 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.36■■□□□ 1.33
CHGBP05060 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.36■■□□□ 1.33
CHGBP05060 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.36■■□□□ 1.33
CHGBP05060 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHGBP05060 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHGBP05060 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
CHGBP05060 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CHGBP05060 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHGBP05060 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHGBP05060 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.35■■□□□ 1.33
CHGBP05060 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.35■■□□□ 1.33
CHGBP05060 NUDT16P1-203ENST00000513809 620 ntBASIC23.35■■□□□ 1.33
CHGBP05060 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.35■■□□□ 1.33
CHGBP05060 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHGBP05060 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.35■■□□□ 1.33
CHGBP05060 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.35■■□□□ 1.33
CHGBP05060 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHGBP05060 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CHGBP05060 ZNF815P-204ENST00000434898 1737 ntBASIC23.35■■□□□ 1.33
CHGBP05060 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms