Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFBP01127 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFBP01127 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFBP01127 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PDGFBP01127 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFBP01127 RASA4DP-201ENST00000460726 1199 ntBASIC19.58■□□□□ 0.72
PDGFBP01127 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.58■□□□□ 0.72
PDGFBP01127 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PDGFBP01127 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.58■□□□□ 0.72
PDGFBP01127 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFBP01127 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFBP01127 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PDGFBP01127 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFBP01127 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 ECEL1P1-201ENST00000373592 1742 ntBASIC19.57■□□□□ 0.72
PDGFBP01127 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.57■□□□□ 0.72
PDGFBP01127 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFBP01127 AP002469.2-201ENST00000531724 424 ntBASIC19.57■□□□□ 0.72
PDGFBP01127 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.57■□□□□ 0.72
PDGFBP01127 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.57■□□□□ 0.72
PDGFBP01127 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.57■□□□□ 0.72
PDGFBP01127 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PDGFBP01127 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
PDGFBP01127 MIR4674-201ENST00000582457 87 ntBASIC19.57■□□□□ 0.72
PDGFBP01127 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PDGFBP01127 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFBP01127 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFBP01127 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFBP01127 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDGFBP01127 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFBP01127 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PDGFBP01127 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFBP01127 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFBP01127 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.56■□□□□ 0.72
PDGFBP01127 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PDGFBP01127 AC244015.2-201ENST00000616358 1861 ntBASIC19.56■□□□□ 0.72
PDGFBP01127 KRT18P1-202ENST00000452408 1331 ntBASIC19.56■□□□□ 0.72
PDGFBP01127 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFBP01127 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
PDGFBP01127 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFBP01127 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFBP01127 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFBP01127 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFBP01127 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
PDGFBP01127 MRPL3P1-201ENST00000400109 1033 ntBASIC19.56■□□□□ 0.72
PDGFBP01127 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.56■□□□□ 0.72
PDGFBP01127 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDGFBP01127 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.56■□□□□ 0.72
PDGFBP01127 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.56■□□□□ 0.72
PDGFBP01127 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.56■□□□□ 0.72
PDGFBP01127 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.56■□□□□ 0.72
PDGFBP01127 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.56■□□□□ 0.72
PDGFBP01127 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFBP01127 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFBP01127 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 PLK5-205ENST00000642079 1969 ntBASIC19.55■□□□□ 0.72
PDGFBP01127 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.55■□□□□ 0.72
PDGFBP01127 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.55■□□□□ 0.72
PDGFBP01127 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.55■□□□□ 0.72
PDGFBP01127 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.55■□□□□ 0.72
PDGFBP01127 AC106795.1-205ENST00000512851 1056 ntBASIC19.55■□□□□ 0.72
PDGFBP01127 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.55■□□□□ 0.72
PDGFBP01127 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 AC091304.2-201ENST00000564639 760 ntBASIC19.55■□□□□ 0.72
PDGFBP01127 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.55■□□□□ 0.72
PDGFBP01127 AC120114.3-201ENST00000611923 658 ntBASIC19.55■□□□□ 0.72
PDGFBP01127 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.55■□□□□ 0.72
PDGFBP01127 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFBP01127 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
PDGFBP01127 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFBP01127 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFBP01127 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PDGFBP01127 FP700111.2-201ENST00000619190 1892 ntBASIC19.54■□□□□ 0.72
PDGFBP01127 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PDGFBP01127 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms