Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE6O95741 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE6O95741 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.08■□□□□ 0.64
CPNE6O95741 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CPNE6O95741 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CPNE6O95741 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.07■□□□□ 0.64
CPNE6O95741 AP006587.1-201ENST00000534129 1502 ntBASIC19.07■□□□□ 0.64
CPNE6O95741 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.07■□□□□ 0.64
CPNE6O95741 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CPNE6O95741 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.07■□□□□ 0.64
CPNE6O95741 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.07■□□□□ 0.64
CPNE6O95741 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.07■□□□□ 0.64
CPNE6O95741 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.07■□□□□ 0.64
CPNE6O95741 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 KRT16P6-202ENST00000425692 1426 ntBASIC19.07■□□□□ 0.64
CPNE6O95741 AC007225.1-201ENST00000566331 1836 ntBASIC19.07■□□□□ 0.64
CPNE6O95741 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE6O95741 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE6O95741 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE6O95741 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE6O95741 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE6O95741 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE6O95741 UNC93B2-201ENST00000285383 730 ntBASIC19.06■□□□□ 0.64
CPNE6O95741 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE6O95741 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.06■□□□□ 0.64
CPNE6O95741 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE6O95741 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE6O95741 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.06■□□□□ 0.64
CPNE6O95741 REXO1L10P-201ENST00000615707 1290 ntBASIC19.06■□□□□ 0.64
CPNE6O95741 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE6O95741 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE6O95741 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE6O95741 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE6O95741 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CPNE6O95741 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CPNE6O95741 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CPNE6O95741 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE6O95741 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE6O95741 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE6O95741 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE6O95741 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE6O95741 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CPNE6O95741 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.05■□□□□ 0.64
CPNE6O95741 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.05■□□□□ 0.64
CPNE6O95741 RBM17P1-201ENST00000453646 1190 ntBASIC19.05■□□□□ 0.64
CPNE6O95741 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.05■□□□□ 0.64
CPNE6O95741 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.05■□□□□ 0.64
CPNE6O95741 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE6O95741 AC010331.1-201ENST00000611423 582 ntBASIC19.05■□□□□ 0.64
CPNE6O95741 CR392000.1-201ENST00000624770 1228 ntBASIC19.05■□□□□ 0.64
CPNE6O95741 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE6O95741 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.05■□□□□ 0.64
CPNE6O95741 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.05■□□□□ 0.64
CPNE6O95741 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE6O95741 AC116562.4-201ENST00000641316 2276 ntBASIC19.04■□□□□ 0.64
CPNE6O95741 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE6O95741 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CPNE6O95741 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE6O95741 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE6O95741 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE6O95741 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CPNE6O95741 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE6O95741 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE6O95741 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE6O95741 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE6O95741 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CPNE6O95741 KRT16P1-201ENST00000399124 1418 ntBASIC19.04■□□□□ 0.64
CPNE6O95741 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.04■□□□□ 0.64
CPNE6O95741 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE6O95741 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE6O95741 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.04■□□□□ 0.64
CPNE6O95741 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.04■□□□□ 0.64
CPNE6O95741 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE6O95741 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CPNE6O95741 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE6O95741 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE6O95741 AC116351.2-201ENST00000606540 1585 ntBASIC19.03■□□□□ 0.64
CPNE6O95741 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE6O95741 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.03■□□□□ 0.64
CPNE6O95741 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE6O95741 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.03■□□□□ 0.64
CPNE6O95741 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms