Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LRCH4O75427 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.24■□□□□ 0.83
LRCH4O75427 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH4O75427 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
LRCH4O75427 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.23■□□□□ 0.83
LRCH4O75427 TEX21P-204ENST00000641479 1693 ntBASIC20.23■□□□□ 0.83
LRCH4O75427 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH4O75427 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH4O75427 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH4O75427 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH4O75427 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH4O75427 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH4O75427 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.23■□□□□ 0.83
LRCH4O75427 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.23■□□□□ 0.83
LRCH4O75427 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.23■□□□□ 0.83
LRCH4O75427 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH4O75427 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.23■□□□□ 0.83
LRCH4O75427 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.23■□□□□ 0.83
LRCH4O75427 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.23■□□□□ 0.83
LRCH4O75427 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH4O75427 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH4O75427 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LRCH4O75427 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH4O75427 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH4O75427 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.22■□□□□ 0.83
LRCH4O75427 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.22■□□□□ 0.83
LRCH4O75427 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
LRCH4O75427 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.22■□□□□ 0.83
LRCH4O75427 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.22■□□□□ 0.83
LRCH4O75427 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
LRCH4O75427 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 CD99P1-205ENST00000527459 561 ntBASIC20.22■□□□□ 0.83
LRCH4O75427 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.22■□□□□ 0.83
LRCH4O75427 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.22■□□□□ 0.83
LRCH4O75427 MIR4651-201ENST00000582622 73 ntBASIC20.22■□□□□ 0.83
LRCH4O75427 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH4O75427 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.22■□□□□ 0.83
LRCH4O75427 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.22■□□□□ 0.83
LRCH4O75427 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LRCH4O75427 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
LRCH4O75427 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.21■□□□□ 0.83
LRCH4O75427 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.21■□□□□ 0.83
LRCH4O75427 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.21■□□□□ 0.83
LRCH4O75427 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LRCH4O75427 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
LRCH4O75427 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRCH4O75427 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.21■□□□□ 0.83
LRCH4O75427 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.21■□□□□ 0.83
LRCH4O75427 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
LRCH4O75427 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LRCH4O75427 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRCH4O75427 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH4O75427 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.21■□□□□ 0.83
LRCH4O75427 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LRCH4O75427 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.2■□□□□ 0.82
LRCH4O75427 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LRCH4O75427 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.2■□□□□ 0.82
LRCH4O75427 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.2■□□□□ 0.82
LRCH4O75427 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.2■□□□□ 0.82
LRCH4O75427 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.2■□□□□ 0.82
LRCH4O75427 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.2■□□□□ 0.82
LRCH4O75427 AL023875.1-201ENST00000640777 796 ntBASIC20.2■□□□□ 0.82
LRCH4O75427 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH4O75427 AC141586.3-201ENST00000562166 1838 ntBASIC20.2■□□□□ 0.82
LRCH4O75427 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms