Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 NIFKP9-201ENST00000419265 221 ntBASIC18.09■□□□□ 0.49
PRKNO60260 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.09■□□□□ 0.49
PRKNO60260 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.09■□□□□ 0.49
PRKNO60260 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PRKNO60260 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.09■□□□□ 0.49
PRKNO60260 AC073195.1-201ENST00000607241 877 ntBASIC18.09■□□□□ 0.49
PRKNO60260 AP001412.1-201ENST00000608405 714 ntBASIC18.09■□□□□ 0.49
PRKNO60260 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKNO60260 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRKNO60260 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKNO60260 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKNO60260 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKNO60260 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKNO60260 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKNO60260 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKNO60260 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.09■□□□□ 0.49
PRKNO60260 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PRKNO60260 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.08■□□□□ 0.49
PRKNO60260 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PRKNO60260 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRKNO60260 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PRKNO60260 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRKNO60260 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRKNO60260 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PRKNO60260 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PRKNO60260 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PRKNO60260 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.08■□□□□ 0.49
PRKNO60260 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRKNO60260 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKNO60260 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.08■□□□□ 0.48
PRKNO60260 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.08■□□□□ 0.48
PRKNO60260 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.08■□□□□ 0.48
PRKNO60260 TSPY15P-201ENST00000457163 923 ntBASIC18.08■□□□□ 0.48
PRKNO60260 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.08■□□□□ 0.48
PRKNO60260 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.08■□□□□ 0.48
PRKNO60260 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.08■□□□□ 0.48
PRKNO60260 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.08■□□□□ 0.48
PRKNO60260 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.08■□□□□ 0.48
PRKNO60260 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKNO60260 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKNO60260 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKNO60260 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKNO60260 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.07■□□□□ 0.48
PRKNO60260 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.07■□□□□ 0.48
PRKNO60260 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.07■□□□□ 0.48
PRKNO60260 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKNO60260 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PRKNO60260 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRKNO60260 TREX1-205ENST00000625293 1783 ntBASIC18.07■□□□□ 0.48
PRKNO60260 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKNO60260 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.07■□□□□ 0.48
PRKNO60260 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.07■□□□□ 0.48
PRKNO60260 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PRKNO60260 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKNO60260 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKNO60260 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKNO60260 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.07■□□□□ 0.48
PRKNO60260 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRKNO60260 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.07■□□□□ 0.48
PRKNO60260 CR392000.1-201ENST00000624770 1228 ntBASIC18.07■□□□□ 0.48
PRKNO60260 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.07■□□□□ 0.48
PRKNO60260 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKNO60260 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKNO60260 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKNO60260 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKNO60260 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
PRKNO60260 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PRKNO60260 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
PRKNO60260 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PRKNO60260 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PRKNO60260 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.06■□□□□ 0.48
PRKNO60260 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PRKNO60260 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.06■□□□□ 0.48
PRKNO60260 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.06■□□□□ 0.48
PRKNO60260 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PRKNO60260 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PRKNO60260 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PRKNO60260 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.06■□□□□ 0.48
PRKNO60260 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.06■□□□□ 0.48
PRKNO60260 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.06■□□□□ 0.48
PRKNO60260 HLA-A-209ENST00000638375 975 ntBASIC18.06■□□□□ 0.48
PRKNO60260 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.06■□□□□ 0.48
PRKNO60260 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
PRKNO60260 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.06■□□□□ 0.48
PRKNO60260 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 KRT8P8-201ENST00000434750 1448 ntBASIC18.06■□□□□ 0.48
PRKNO60260 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKNO60260 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms