Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH7O60245 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH7O60245 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 UNC93B4-201ENST00000505679 747 ntBASIC18.55■□□□□ 0.56
PCDH7O60245 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PCDH7O60245 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDH7O60245 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PCDH7O60245 AL020996.1-203ENST00000536896 2307 ntBASIC18.55■□□□□ 0.56
PCDH7O60245 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
PCDH7O60245 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH7O60245 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH7O60245 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 ID1-201ENST00000376105 1233 ntBASIC18.54■□□□□ 0.56
PCDH7O60245 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.54■□□□□ 0.56
PCDH7O60245 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDH7O60245 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH7O60245 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
PCDH7O60245 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH7O60245 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDH7O60245 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH7O60245 ZNF815P-204ENST00000434898 1737 ntBASIC18.54■□□□□ 0.56
PCDH7O60245 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH7O60245 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDH7O60245 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PCDH7O60245 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH7O60245 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH7O60245 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH7O60245 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCDH7O60245 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH7O60245 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH7O60245 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH7O60245 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
PCDH7O60245 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDH7O60245 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDH7O60245 UNC93B5-201ENST00000530315 699 ntBASIC18.53■□□□□ 0.56
PCDH7O60245 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDH7O60245 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDH7O60245 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH7O60245 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDH7O60245 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH7O60245 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH7O60245 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH7O60245 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH7O60245 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH7O60245 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH7O60245 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH7O60245 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDH7O60245 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDH7O60245 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDH7O60245 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH7O60245 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH7O60245 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH7O60245 KRT8P8-201ENST00000434750 1448 ntBASIC18.52■□□□□ 0.56
PCDH7O60245 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH7O60245 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH7O60245 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDH7O60245 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDH7O60245 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDH7O60245 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH7O60245 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH7O60245 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH7O60245 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDH7O60245 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDH7O60245 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH7O60245 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH7O60245 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH7O60245 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH7O60245 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH7O60245 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH7O60245 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
PCDH7O60245 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH7O60245 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH7O60245 POM121L13P-201ENST00000422362 380 ntBASIC18.51■□□□□ 0.55
PCDH7O60245 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH7O60245 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms