Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXTL3O43909 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EXTL3O43909 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
EXTL3O43909 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EXTL3O43909 KSR1P1-201ENST00000446298 240 ntBASIC21.11■□□□□ 0.97
EXTL3O43909 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
EXTL3O43909 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.11■□□□□ 0.97
EXTL3O43909 AC073195.1-201ENST00000607241 877 ntBASIC21.11■□□□□ 0.97
EXTL3O43909 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
EXTL3O43909 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.11■□□□□ 0.97
EXTL3O43909 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EXTL3O43909 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.1■□□□□ 0.97
EXTL3O43909 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.1■□□□□ 0.97
EXTL3O43909 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EXTL3O43909 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EXTL3O43909 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.1■□□□□ 0.97
EXTL3O43909 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
EXTL3O43909 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EXTL3O43909 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
EXTL3O43909 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EXTL3O43909 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EXTL3O43909 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EXTL3O43909 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EXTL3O43909 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.1■□□□□ 0.97
EXTL3O43909 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EXTL3O43909 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.1■□□□□ 0.97
EXTL3O43909 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.1■□□□□ 0.97
EXTL3O43909 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.1■□□□□ 0.97
EXTL3O43909 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EXTL3O43909 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
EXTL3O43909 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EXTL3O43909 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
EXTL3O43909 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.09■□□□□ 0.97
EXTL3O43909 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EXTL3O43909 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.09■□□□□ 0.97
EXTL3O43909 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
EXTL3O43909 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EXTL3O43909 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EXTL3O43909 MIR718-201ENST00000390190 70 ntBASIC21.09■□□□□ 0.97
EXTL3O43909 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.09■□□□□ 0.97
EXTL3O43909 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
EXTL3O43909 AP001412.1-201ENST00000608405 714 ntBASIC21.09■□□□□ 0.97
EXTL3O43909 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.09■□□□□ 0.97
EXTL3O43909 AC104417.2-201ENST00000562989 1793 ntBASIC21.09■□□□□ 0.97
EXTL3O43909 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
EXTL3O43909 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EXTL3O43909 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
EXTL3O43909 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.08■□□□□ 0.97
EXTL3O43909 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.08■□□□□ 0.97
EXTL3O43909 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.08■□□□□ 0.97
EXTL3O43909 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EXTL3O43909 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
EXTL3O43909 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EXTL3O43909 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
EXTL3O43909 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.08■□□□□ 0.97
EXTL3O43909 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
EXTL3O43909 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
EXTL3O43909 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
EXTL3O43909 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.08■□□□□ 0.97
EXTL3O43909 AL049637.2-201ENST00000641778 930 ntBASIC21.08■□□□□ 0.97
EXTL3O43909 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EXTL3O43909 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EXTL3O43909 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EXTL3O43909 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
EXTL3O43909 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
EXTL3O43909 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EXTL3O43909 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.08■□□□□ 0.96
EXTL3O43909 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EXTL3O43909 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EXTL3O43909 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.07■□□□□ 0.96
EXTL3O43909 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EXTL3O43909 KRT16P1-201ENST00000399124 1418 ntBASIC21.07■□□□□ 0.96
EXTL3O43909 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.07■□□□□ 0.96
EXTL3O43909 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EXTL3O43909 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EXTL3O43909 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EXTL3O43909 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.07■□□□□ 0.96
EXTL3O43909 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
EXTL3O43909 AL160286.2-201ENST00000567150 934 ntBASIC21.07■□□□□ 0.96
EXTL3O43909 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
EXTL3O43909 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
EXTL3O43909 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EXTL3O43909 LINC01465-201ENST00000408887 1940 ntBASIC21.07■□□□□ 0.96
EXTL3O43909 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EXTL3O43909 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EXTL3O43909 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.07■□□□□ 0.96
EXTL3O43909 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EXTL3O43909 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.07■□□□□ 0.96
EXTL3O43909 Z82202.1-201ENST00000623446 1880 ntBASIC21.07■□□□□ 0.96
EXTL3O43909 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
EXTL3O43909 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.06■□□□□ 0.96
EXTL3O43909 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms