Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK2O43353 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.74■□□□□ 0.75
RIPK2O43353 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.74■□□□□ 0.75
RIPK2O43353 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.74■□□□□ 0.75
RIPK2O43353 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.74■□□□□ 0.75
RIPK2O43353 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
RIPK2O43353 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK2O43353 AC018470.1-201ENST00000624790 3129 ntBASIC19.74■□□□□ 0.75
RIPK2O43353 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK2O43353 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK2O43353 AC068338.2-201ENST00000563278 1430 ntBASIC19.74■□□□□ 0.75
RIPK2O43353 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.74■□□□□ 0.75
RIPK2O43353 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK2O43353 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.74■□□□□ 0.75
RIPK2O43353 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIPK2O43353 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.73■□□□□ 0.75
RIPK2O43353 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RIPK2O43353 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.73■□□□□ 0.75
RIPK2O43353 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
RIPK2O43353 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RIPK2O43353 C2orf69P4-201ENST00000565394 541 ntBASIC19.73■□□□□ 0.75
RIPK2O43353 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.73■□□□□ 0.75
RIPK2O43353 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.73■□□□□ 0.75
RIPK2O43353 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.73■□□□□ 0.75
RIPK2O43353 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RIPK2O43353 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK2O43353 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.72■□□□□ 0.75
RIPK2O43353 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK2O43353 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK2O43353 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RIPK2O43353 BICD1-207ENST00000551848 1962 ntBASIC19.72■□□□□ 0.75
RIPK2O43353 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK2O43353 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.72■□□□□ 0.75
RIPK2O43353 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK2O43353 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK2O43353 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RIPK2O43353 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK2O43353 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.72■□□□□ 0.75
RIPK2O43353 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK2O43353 AL355472.2-201ENST00000422958 438 ntBASIC19.72■□□□□ 0.75
RIPK2O43353 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.72■□□□□ 0.75
RIPK2O43353 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RIPK2O43353 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.72■□□□□ 0.75
RIPK2O43353 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.72■□□□□ 0.75
RIPK2O43353 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RIPK2O43353 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
RIPK2O43353 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RIPK2O43353 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RIPK2O43353 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.72■□□□□ 0.75
RIPK2O43353 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK2O43353 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RIPK2O43353 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK2O43353 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK2O43353 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RIPK2O43353 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK2O43353 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK2O43353 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
RIPK2O43353 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK2O43353 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK2O43353 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.71■□□□□ 0.75
RIPK2O43353 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK2O43353 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK2O43353 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.71■□□□□ 0.75
RIPK2O43353 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK2O43353 CNN2P6-201ENST00000439038 900 ntBASIC19.71■□□□□ 0.75
RIPK2O43353 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.71■□□□□ 0.75
RIPK2O43353 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.71■□□□□ 0.75
RIPK2O43353 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.71■□□□□ 0.75
RIPK2O43353 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RIPK2O43353 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.7■□□□□ 0.74
RIPK2O43353 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RIPK2O43353 AL512353.2-201ENST00000448759 1962 ntBASIC19.7■□□□□ 0.74
RIPK2O43353 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.7■□□□□ 0.74
RIPK2O43353 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.7■□□□□ 0.74
RIPK2O43353 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.7■□□□□ 0.74
RIPK2O43353 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.7■□□□□ 0.74
RIPK2O43353 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.7■□□□□ 0.74
RIPK2O43353 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.7■□□□□ 0.74
RIPK2O43353 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms