Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AL390955.1-201ENST00000428694 934 ntBASIC21.89■■□□□ 1.09
DDX39AO00148 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.89■■□□□ 1.09
DDX39AO00148 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DDX39AO00148 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.89■■□□□ 1.09
DDX39AO00148 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.89■■□□□ 1.09
DDX39AO00148 AC131212.4-201ENST00000623606 975 ntBASIC21.89■■□□□ 1.09
DDX39AO00148 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX39AO00148 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX39AO00148 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
DDX39AO00148 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DDX39AO00148 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DDX39AO00148 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.88■■□□□ 1.09
DDX39AO00148 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX39AO00148 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX39AO00148 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
DDX39AO00148 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
DDX39AO00148 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
DDX39AO00148 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX39AO00148 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX39AO00148 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX39AO00148 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX39AO00148 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
DDX39AO00148 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX39AO00148 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DDX39AO00148 AC087499.1-201ENST00000418141 1075 ntBASIC21.88■■□□□ 1.09
DDX39AO00148 AC011506.1-201ENST00000474329 610 ntBASIC21.88■■□□□ 1.09
DDX39AO00148 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX39AO00148 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.88■■□□□ 1.09
DDX39AO00148 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.88■■□□□ 1.09
DDX39AO00148 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.88■■□□□ 1.09
DDX39AO00148 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.88■■□□□ 1.09
DDX39AO00148 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.88■■□□□ 1.09
DDX39AO00148 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX39AO00148 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX39AO00148 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX39AO00148 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.88■■□□□ 1.09
DDX39AO00148 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX39AO00148 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX39AO00148 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX39AO00148 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX39AO00148 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DDX39AO00148 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
DDX39AO00148 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.87■■□□□ 1.09
DDX39AO00148 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX39AO00148 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX39AO00148 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.87■■□□□ 1.09
DDX39AO00148 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX39AO00148 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.87■■□□□ 1.09
DDX39AO00148 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX39AO00148 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.87■■□□□ 1.09
DDX39AO00148 MESTP1-201ENST00000404287 994 ntBASIC21.87■■□□□ 1.09
DDX39AO00148 AC211429.1-201ENST00000415277 523 ntBASIC21.87■■□□□ 1.09
DDX39AO00148 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.87■■□□□ 1.09
DDX39AO00148 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
DDX39AO00148 AC116562.2-201ENST00000507042 360 ntBASIC21.87■■□□□ 1.09
DDX39AO00148 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.87■■□□□ 1.09
DDX39AO00148 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.87■■□□□ 1.09
DDX39AO00148 MIR6786-201ENST00000616843 113 ntBASIC21.87■■□□□ 1.09
DDX39AO00148 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX39AO00148 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX39AO00148 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX39AO00148 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.87■■□□□ 1.09
DDX39AO00148 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX39AO00148 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX39AO00148 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX39AO00148 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.86■■□□□ 1.09
DDX39AO00148 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.86■■□□□ 1.09
DDX39AO00148 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX39AO00148 UNC93B2-201ENST00000285383 730 ntBASIC21.86■■□□□ 1.09
DDX39AO00148 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DDX39AO00148 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.86■■□□□ 1.09
DDX39AO00148 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX39AO00148 MIR1238-201ENST00000408483 83 ntBASIC21.86■■□□□ 1.09
DDX39AO00148 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.86■■□□□ 1.09
DDX39AO00148 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.86■■□□□ 1.09
DDX39AO00148 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.86■■□□□ 1.09
DDX39AO00148 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DDX39AO00148 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DDX39AO00148 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.86■■□□□ 1.09
DDX39AO00148 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
DDX39AO00148 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX39AO00148 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.85■■□□□ 1.09
DDX39AO00148 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
DDX39AO00148 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.85■■□□□ 1.09
DDX39AO00148 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX39AO00148 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX39AO00148 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
DDX39AO00148 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
DDX39AO00148 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.85■■□□□ 1.09
DDX39AO00148 B3GAT3P1-201ENST00000471720 806 ntBASIC21.85■■□□□ 1.09
DDX39AO00148 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
DDX39AO00148 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.85■■□□□ 1.09
DDX39AO00148 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.85■■□□□ 1.09
DDX39AO00148 AC133561.5-201ENST00000635547 218 ntBASIC21.85■■□□□ 1.09
DDX39AO00148 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
DDX39AO00148 KRT8P9-201ENST00000558927 1449 ntBASIC21.85■■□□□ 1.09
DDX39AO00148 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX39AO00148 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX39AO00148 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX39AO00148 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 1322.5 ms