Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01548A6NM66 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01548A6NM66 NIFKP9-201ENST00000419265 221 ntBASIC15.35■□□□□ 0.05
LINC01548A6NM66 AL353807.1-201ENST00000427475 662 ntBASIC15.35■□□□□ 0.05
LINC01548A6NM66 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01548A6NM66 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 MIR4497-201ENST00000583208 89 ntBASIC15.35■□□□□ 0.05
LINC01548A6NM66 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 AL353708.3-201ENST00000610272 989 ntBASIC15.35■□□□□ 0.05
LINC01548A6NM66 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01548A6NM66 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01548A6NM66 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LINC01548A6NM66 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01548A6NM66 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01548A6NM66 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01548A6NM66 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01548A6NM66 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01548A6NM66 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01548A6NM66 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01548A6NM66 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01548A6NM66 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01548A6NM66 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01548A6NM66 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01548A6NM66 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 AP001412.1-201ENST00000608405 714 ntBASIC15.34■□□□□ 0.05
LINC01548A6NM66 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01548A6NM66 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01548A6NM66 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LINC01548A6NM66 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01548A6NM66 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01548A6NM66 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC01548A6NM66 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
LINC01548A6NM66 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.33■□□□□ 0.05
LINC01548A6NM66 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC01548A6NM66 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
LINC01548A6NM66 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC01548A6NM66 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC01548A6NM66 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01548A6NM66 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01548A6NM66 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01548A6NM66 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01548A6NM66 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01548A6NM66 KSR1P1-201ENST00000446298 240 ntBASIC15.33■□□□□ 0.04
LINC01548A6NM66 TSPY15P-201ENST00000457163 923 ntBASIC15.33■□□□□ 0.04
LINC01548A6NM66 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01548A6NM66 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.33■□□□□ 0.04
LINC01548A6NM66 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.33■□□□□ 0.04
LINC01548A6NM66 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC01548A6NM66 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC01548A6NM66 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01548A6NM66 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01548A6NM66 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01548A6NM66 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01548A6NM66 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
LINC01548A6NM66 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01548A6NM66 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
LINC01548A6NM66 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01548A6NM66 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01548A6NM66 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LINC01548A6NM66 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01548A6NM66 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01548A6NM66 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
LINC01548A6NM66 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LINC01548A6NM66 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01548A6NM66 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINC01548A6NM66 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.32■□□□□ 0.04
LINC01548A6NM66 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC01548A6NM66 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LINC01548A6NM66 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01548A6NM66 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.32■□□□□ 0.04
LINC01548A6NM66 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC01548A6NM66 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINC01548A6NM66 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms