Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.93■□□□□ 0.94
LRRC53A6NM62 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC53A6NM62 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC53A6NM62 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC53A6NM62 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.93■□□□□ 0.94
LRRC53A6NM62 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC53A6NM62 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.93■□□□□ 0.94
LRRC53A6NM62 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.93■□□□□ 0.94
LRRC53A6NM62 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.93■□□□□ 0.94
LRRC53A6NM62 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC53A6NM62 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC53A6NM62 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.93■□□□□ 0.94
LRRC53A6NM62 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC53A6NM62 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LRRC53A6NM62 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC53A6NM62 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC53A6NM62 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC53A6NM62 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LRRC53A6NM62 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC53A6NM62 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LRRC53A6NM62 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LRRC53A6NM62 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRC53A6NM62 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LRRC53A6NM62 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRC53A6NM62 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.92■□□□□ 0.94
LRRC53A6NM62 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
LRRC53A6NM62 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
LRRC53A6NM62 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRC53A6NM62 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC53A6NM62 TSPY6P-201ENST00000448518 926 ntBASIC20.92■□□□□ 0.94
LRRC53A6NM62 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC53A6NM62 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LRRC53A6NM62 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC53A6NM62 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.92■□□□□ 0.94
LRRC53A6NM62 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC53A6NM62 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC53A6NM62 SDHAP1-207ENST00000440850 2000 ntBASIC20.92■□□□□ 0.94
LRRC53A6NM62 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
LRRC53A6NM62 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC53A6NM62 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC53A6NM62 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC53A6NM62 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC53A6NM62 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC53A6NM62 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC53A6NM62 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
LRRC53A6NM62 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC53A6NM62 SLC29A4P1-201ENST00000398760 971 ntBASIC20.91■□□□□ 0.94
LRRC53A6NM62 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LRRC53A6NM62 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.91■□□□□ 0.94
LRRC53A6NM62 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC53A6NM62 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.91■□□□□ 0.94
LRRC53A6NM62 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.91■□□□□ 0.94
LRRC53A6NM62 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.91■□□□□ 0.94
LRRC53A6NM62 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.91■□□□□ 0.94
LRRC53A6NM62 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.91■□□□□ 0.94
LRRC53A6NM62 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.91■□□□□ 0.94
LRRC53A6NM62 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.91■□□□□ 0.94
LRRC53A6NM62 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LRRC53A6NM62 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LRRC53A6NM62 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC53A6NM62 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC53A6NM62 AC006333.2-201ENST00000607957 2099 ntBASIC20.9■□□□□ 0.94
LRRC53A6NM62 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC53A6NM62 AC104417.2-201ENST00000562989 1793 ntBASIC20.9■□□□□ 0.94
LRRC53A6NM62 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
LRRC53A6NM62 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.9■□□□□ 0.94
LRRC53A6NM62 AC092368.3-202ENST00000574180 1591 ntBASIC20.9■□□□□ 0.94
LRRC53A6NM62 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC53A6NM62 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC53A6NM62 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC53A6NM62 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC53A6NM62 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC53A6NM62 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC53A6NM62 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC53A6NM62 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LRRC53A6NM62 MIR935-201ENST00000401179 91 ntBASIC20.9■□□□□ 0.94
LRRC53A6NM62 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.9■□□□□ 0.94
LRRC53A6NM62 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.9■□□□□ 0.94
LRRC53A6NM62 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.9■□□□□ 0.94
LRRC53A6NM62 NCF1B-203ENST00000435988 1254 ntBASIC20.9■□□□□ 0.94
LRRC53A6NM62 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.9■□□□□ 0.94
LRRC53A6NM62 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.9■□□□□ 0.94
LRRC53A6NM62 MYC-209ENST00000641252 345 ntBASIC20.9■□□□□ 0.94
LRRC53A6NM62 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC53A6NM62 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC53A6NM62 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC53A6NM62 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LRRC53A6NM62 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRC53A6NM62 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRC53A6NM62 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
LRRC53A6NM62 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRC53A6NM62 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRC53A6NM62 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRC53A6NM62 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRRC53A6NM62 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.89■□□□□ 0.94
LRRC53A6NM62 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRC53A6NM62 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
LRRC53A6NM62 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LRRC53A6NM62 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC53A6NM62 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms