Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD3L5A6NJ08 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 PRSS44-201ENST00000515154 1146 ntBASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 LINC01006-201ENST00000333319 2292 ntBASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MBD3L5A6NJ08 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MBD3L5A6NJ08 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MBD3L5A6NJ08 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.08■□□□□ 0.33
MBD3L5A6NJ08 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.08■□□□□ 0.33
MBD3L5A6NJ08 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 AC104076.2-201ENST00000448912 469 ntBASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 DUX4L26-201ENST00000489078 1255 ntBASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 AL353719.1-201ENST00000566847 864 ntBASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
MBD3L5A6NJ08 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 BX664615.1-201ENST00000443558 458 ntBASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 AC006011.2-201ENST00000621313 1158 ntBASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L5A6NJ08 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.06■□□□□ 0.32
MBD3L5A6NJ08 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms