Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
TRABD2BA6NFA1 AC140113.3-201ENST00000605663 199 ntBASIC18.68■□□□□ 0.58
TRABD2BA6NFA1 AC116407.4-201ENST00000623319 1061 ntBASIC18.68■□□□□ 0.58
TRABD2BA6NFA1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRABD2BA6NFA1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRABD2BA6NFA1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRABD2BA6NFA1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TRABD2BA6NFA1 AC005332.1-201ENST00000577698 1310 ntBASIC18.68■□□□□ 0.58
TRABD2BA6NFA1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRABD2BA6NFA1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TRABD2BA6NFA1 RCC2P6-201ENST00000526625 1557 ntBASIC18.68■□□□□ 0.58
TRABD2BA6NFA1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRABD2BA6NFA1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 AC004951.3-201ENST00000418645 1148 ntBASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 TUBB8P6-201ENST00000436895 1288 ntBASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 AL359075.1-203ENST00000462729 1002 ntBASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 AC069148.1-201ENST00000608741 768 ntBASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 KRT8P17-201ENST00000453110 1448 ntBASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.66■□□□□ 0.58
TRABD2BA6NFA1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRABD2BA6NFA1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRABD2BA6NFA1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRABD2BA6NFA1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.58
TRABD2BA6NFA1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRABD2BA6NFA1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms